RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 UPK1AO00322 258 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ARNTLO00327 626 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ENPP3O14638 875 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ANKRD28O15084 1053 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 INSIG1O15503 277 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SEPT4O43236 478 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 KDELR3O43731 214 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TBC1D4O60343 1298 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SNAP91O60641 907 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SNX2O60749 519 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 VPS26AO75436 327 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NDUFS3O75489 264 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 C1RP00736 705 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PYGLP06737 847 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ASGR1P07306 291 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 MTHFD1P11586 935 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PKMP14618 531 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CES1P23141 567 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 RPL10P27635 214 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 DCKP27707 260 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SLC6A4P31645 630 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TTKP33981 857 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 RPS9P46781 194 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 AGTR2P50052 363 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 POLR2JP52435 117 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NUP107P57740 925 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 KCNK10P57789 538 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 GRSF1Q12849 480 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CBX2Q14781 532 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CRY1Q16526 586 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CYP51A1Q16850 503 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 GEN1Q17RS7 908 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TBC1D25Q3MII6 688 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 AASDHQ4L235 1098 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CTSL3PQ5NE16 218 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 C6orf136Q5SQH8 315 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NANOGP8Q6NSW7 305 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TTC33Q6PID6 262 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 DLEU7Q6UYE1 221 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 RNF165Q6ZSG1 346 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 Q6ZSR9 355 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 GPRIN3Q6ZVF9 776 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SLC24A5Q71RS6 500 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 LYSMD3Q7Z3D4 306 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 GPR141Q7Z602 305 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PROSER1Q86XN7 944 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF354CQ86Y25 554 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 MIB1Q86YT6 1006 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 HID1Q8IV36 788 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PIANPQ8IYJ0 282 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF786Q8N393 782 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 BBS5Q8N3I7 341 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TTC30BQ8N4P2 665 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CHCHD4Q8N4Q1 142 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 LEMD2Q8NC56 503 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 OR7D4Q8NG98 312 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 OR4K2Q8NGD2 314 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 OR56A4Q8NGH8 313 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF420Q8TAQ5 688 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 DNAJB14Q8TBM8 379 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PROKR1Q8TCW9 393 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CD200R1Q8TD46 325 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 GPR152Q8TDT2 470 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 OSCP1Q8WVF1 389 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TRIB2Q92519 343 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 KCNJ9Q92806 393 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 VPS33AQ96AX1 596 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 BIRC7Q96CA5 298 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ISOC1Q96CN7 298 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PDLIM5Q96HC4 596 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PLEKHG4BQ96PX9 1271 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 KCTD14Q9BQ13 255 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 HGH1Q9BTY7 390 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TTLL2Q9BWV7 592 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TDRD1Q9BXT4 1180 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 LRRC3Q9BY71 257 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 CRISPLD1Q9H336 500 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 HIPK3Q9H422 1215 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ACTL8Q9H568 366 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 RPF2Q9H7B2 306 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NANOGQ9H9S0 305 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NTN4Q9HB63 628 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PREBQ9HCU5 417 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SRA1Q9HD15 236 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 PFDN4Q9NQP4 134 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 TLR9Q9NR96 1032 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SMPD3Q9NY59 655 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 SLAMF8Q9P0V8 285 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF232Q9UNY5 417 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 FAM50BQ9Y247 325 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 NEUROG3Q9Y4Z2 214 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 FADS3Q9Y5Q0 445 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 COMMD10Q9Y6G5 202 aa5.13□□□□□ -1.59
ATPAF1-212ENST00000542495 RNF103-CHMP3A0A140T963 221 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 UBA6A0AVT1 1052 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 MTMR11A4FU01 709 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 C2orf81A6NN90 581 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 IFRD1O00458 451 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 BTN3A1O00481 513 aa5.12□□□□□ -1.59
ATPAF1-212ENST00000542495 EI24O14681 340 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms