RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PMS2P2O95744 297 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 GGPS1O95749 300 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 BAG2O95816 211 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 EGFP01133 1207 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 TUBBP07437 444 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 IVLP07476 585 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PRR23D2P0DMB1 279 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 ACTN1P12814 892 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 GCFC2P16383 781 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 CCNCP24863 283 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PSMA3P25788 255 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PON1P27169 355 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ATP5DP30049 168 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 MNAT1P51948 309 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PNLIPRP2P54317 469 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 GAS1P54826 345 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 MRPS5P82675 430 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 FOXM1Q08050 763 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ACSM2AQ08AH3 577 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 COX10Q12887 443 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 BFSP1Q12934 665 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 IKQ13123 557 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 ZRSR1Q15695 479 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 CLPPQ16740 277 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 CCDC152Q4G0S7 254 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SOWAHCQ53LP3 525 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 CCDC158Q5M9N0 1113 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SFMBT2Q5VUG0 894 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 C9orf57Q5W0N0 161 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 KRT79Q5XKE5 535 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ACSM2BQ68CK6 577 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 DUS1LQ6P1R4 473 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 SPSB3Q6PJ21 355 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PRSS57Q6UWY2 283 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 DENND5BQ6ZUT9 1274 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 DPPA4Q7L190 304 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ARMC9Q7Z3E5 817 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 KIAA1328Q86T90 577 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 KBTBD6Q86V97 674 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SNX32Q86XE0 403 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PEX5LQ8IYB4 626 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 DCP1BQ8IZD4 617 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 OR8H3Q8N146 312 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ARL6IP6Q8N6S5 226 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 KCNH5Q8NCM2 988 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 OR14L1PQ8NHC6 308 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 LMO3Q8TAP4 145 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 AFAP1L1Q8TED9 768 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 TEKT4Q8WW24 435 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 VPS33AQ96AX1 596 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ORAI1Q96D31 301 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 RMDN1Q96DB5 314 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 TMCO6Q96DC7 493 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ELMOD3Q96FG2 381 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 TMEM19Q96HH6 336 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 JAKMIP1Q96N16 626 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 RAB3IPQ96QF0 476 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 ACOX2Q99424 681 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SH3GL1Q99961 368 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 THUMPD2Q9BTF0 503 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 KIFC3Q9BVG8 833 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PANK2Q9BZ23 570 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 LRRCC1Q9C099 1032 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 KCNN2Q9H2S1 579 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 HRH4Q9H3N8 390 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PLK3Q9H4B4 646 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 MMP25Q9NPA2 562 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ABCF3Q9NUQ8 709 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 ZNHIT6Q9NWK9 470 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 ARHGEF38Q9NXL2 777 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 MCM9Q9NXL9 1143 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 IL20Q9NYY1 176 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SEPT10Q9P0V9 454 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 C5AR2Q9P296 337 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 RABL2AQ9UBK7 228 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 XPO7Q9UIA9 1087 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 ANAPC5Q9UJX4 755 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 GTF3C4Q9UKN8 822 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 EXO1Q9UQ84 846 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 WDR37Q9Y2I8 494 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 PTRH2Q9Y3E5 179 aaKnown RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 LOXL2Q9Y4K0 774 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 BRD4O60885 1362 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 PLEKHG2Q9H7P9 1386 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 CEP162Q5TB80 1403 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 AKNAQ7Z591 1439 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 EVC2Q86UK5 1308 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 NACADO15069 1562 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 TCRBV21S2A2A0A5A6 115 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 GOLGA6L10A6NI86 522 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 HNRNPCL2B2RXH8 293 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 PI4K2BG5E9Z4 385 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 PSMA7O14818 248 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 SPINT2O43291 252 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 MITFO75030 526 aaPredicted RBP3.18□□□□□ -1.9
USP28-210ENST00000542033 AVILO75366 819 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 DAB1O75553 588 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 JRKO75564 520 aa3.18□□□□□ -1.9
USP28-210ENST00000542033 PPP1R3DO95685 299 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms