RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 BTN2A3PQ96KV6 586 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 C20orf173Q96LM9 149 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CPXM1Q96SM3 734 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 PRPF18Q99633 342 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 NUP58Q9BVL2 599 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ACTRT3Q9BYD9 372 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 EDEM3Q9BZQ6 932 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TRIM5Q9C035 493 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CIPCQ9C0C6 399 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 AMBRA1Q9C0C7 1298 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 GANQ9H2C0 597 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SLC25A32Q9H2D1 315 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CXorf36Q9H7Y0 433 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 UNKLQ9H9P5 680 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 DDIT4Q9NX09 232 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ELOVL2Q9NXB9 296 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 DNAJB11Q9UBS4 358 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SUN2Q9UH99 717 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CYTH4Q9UIA0 394 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SERTAD3Q9UJW9 196 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 MYO6Q9UM54 1294 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 F5P12259 2224 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CACNA1IQ9P0X4 2223 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ZDBF2Q9HCK1 2354 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 FANCMQ8IYD8 2048 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SYNJ2BP-COX16A0A087WUM0 186 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 UQCRHLA0A096LP55 91 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 GOLGA6L7A0A1B0GV03 622 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 TCRBV21S2A2A0A5A6 115 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 KCNU1A8MYU2 1149 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PRRT4C9JH25 899 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 H0Y626 953 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 M0QYT0 321 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SGK1O00141 431 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PIP5K1BO14986 540 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CD3EAPO15446 510 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 DAB1O75553 588 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 GRAP2O75791 330 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 MOCS2O96007 188 aaPredicted RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 IGLV3-25P01717 112 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ERBB2P04626 1255 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CALB1P05937 261 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 UQCRHP07919 91 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PNMA6AP0CW24 399 aaPredicted RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 EGR1P18146 543 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 TACR2P21452 398 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 GATA3P23771 443 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NNMTP40261 264 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NSFP46459 744 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 KLK7P49862 253 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SULT1E1P49888 294 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NXPH1P58417 271 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ARHGAP8P85298 464 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 DEUP1Q05D60 604 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 DMWDQ09019 674 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NME3Q13232 169 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SLC12A1Q13621 1099 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CDH18Q13634 790 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PTK2BQ14289 1009 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ZIK1Q3SY52 487 aaPredicted RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PTPN20Q4JDL3 420 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 FBLN7Q53RD9 439 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 MS4A13Q5J8X5 152 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SPDYCQ5MJ68 293 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 BRMS1LQ5PSV4 323 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 TEDDM1Q5T9Z0 273 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NAA35Q5VZE5 725 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 OLFML1Q6UWY5 402 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 LRRC31Q6UY01 552 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 RFX8Q6ZV50 586 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CHST9Q7L1S5 443 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 LPCAT2Q7L5N7 544 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ARCQ7LC44 396 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 TAC4Q86UU9 113 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CHSY1Q86X52 802 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 MFN1Q8IWA4 741 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CCDC28AQ8IWP9 274 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 DHX40Q8IX18 779 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 LGI2Q8N0V4 545 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CARNMT1Q8N4J0 409 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 NKAPQ8N5F7 415 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 FIBINQ8TAL6 211 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ABHD5Q8WTS1 349 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 GRAMD1AQ96CP6 724 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PIWIL1Q96J94 861 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 HIST1H2AAQ96QV6 131 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 GABRG3Q99928 467 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 AGPAT1Q99943 283 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 CASS4Q9NQ75 786 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 SEPT11Q9NVA2 429 aaKnown RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 C2orf42Q9NWW7 574 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 COX16Q9P0S2 106 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 THAP10Q9P2Z0 257 aaPredicted RBP5.47□□□□□ -1.53
CPSF7-220ENST00000541963 TSC22D4Q9Y3Q8 395 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 PCDHGA5Q9Y5G8 931 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 STON1Q9Y6Q2 735 aa5.47□□□□□ -1.53
CPSF7-220ENST00000541963 ATG2BQ96BY7 2078 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms