RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FCRL4Q96PJ5 515 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 OR52B2Q96RD2 323 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 A0A1W2PPW3 197 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 HTRA2O43464 458 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 IFNA16P05015 189 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 PSKH1P11801 424 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 PORP16435 677 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 AQP1P29972 269 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 CDH12P55289 794 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 VBP1P61758 197 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 RHBDF2Q6PJF5 856 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ABHD15Q6UXT9 468 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 RPTNQ6XPR3 784 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 LIX1Q8N485 282 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 B3GNT5Q9BYG0 378 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 C1orf109Q9NX04 203 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 AJAP1Q9UKB5 411 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ERN1O75460 977 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 RHOQP17081 205 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 PTPRAP18433 802 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 MAZP56270 477 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 DCDC1P59894 354 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 RFTN1Q14699 578 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 TCEA2Q15560 299 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 DPYSL2Q16555 572 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 MON1AQ86VX9 555 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 CMASQ8NFW8 434 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 TMBIM1Q969X1 311 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 SGK2Q9HBY8 427 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 IL1RAPQ9NPH3 570 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 H0YAE9 185 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 DENRO43583 198 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 FMO3P31513 532 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ARFIP1P53367 373 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF45Q02386 682 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 IKBKEQ14164 716 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF730Q6ZMV8 503 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 DET1Q7L5Y6 550 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 SLC4A9Q96Q91 983 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 LMAN2LQ9H0V9 348 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 STOX2Q9P2F5 926 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 OR4F21O95013 312 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 GNAZP19086 355 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 PRKCHP24723 683 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 ATP4BP51164 291 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TAF13Q15543 124 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CRTC2Q53ET0 693 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 XKR5Q6UX68 686 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 COLGALT2Q8IYK4 626 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 OR4K2Q8NGD2 314 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 MMP27Q9H306 513 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 ZDHHC6Q9H6R6 413 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 GDAP2Q9NXN4 497 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TEX264Q9Y6I9 313 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 COL1A2P08123 1366 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 DCCP43146 1447 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 METTL21EPA6NDL7 271 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 FAM25EA8MYX2 175 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 B4GALT5O43286 388 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 SLC2A2P11168 524 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 PFKPQ01813 784 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 MXD1Q05195 221 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TGFBIQ15582 683 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.78□□□□□ -0.041e-7■■■■■ 34.5
SMARCA4-207ENST00000541122 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CAPN13Q6MZZ7 669 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 SIPA1Q96FS4 1042 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TRNT1Q96Q11 434 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 AARSD1Q9BTE6 412 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 SIRPGQ9P1W8 387 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 PCDHA2Q9Y5H9 948 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 hCG_2039718K7EN88 272 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 LDOC1O95751 146 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CST3P01034 146 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 NPPAP01160 153 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 ESRP1Q6NXG1 681 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 SPAG16Q8N0X2 631 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TMIEQ8NEW7 156 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TRUB1Q8WWH5 349 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 HTATIP2Q9BUP3 242 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 RNF38Q9H0F5 515 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 EIF3KQ9UBQ5 218 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 FZD10Q9ULW2 581 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 A6NHS1 94 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 INMTO95050 263 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 FCGRTP55899 365 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 GNG2P59768 71 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CBLBQ13191 982 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 TMEM198Q66K66 360 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CHSY3Q70JA7 882 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 CCDC28AQ8IWP9 274 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 KBTBD7Q8WVZ9 684 aa14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 HDAC2Q92769 488 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-207ENST00000541122 KCTD7Q96MP8 289 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms