RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF599Q96NL3 588 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 PKMYT1Q99640 499 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 HEPHQ9BQS7 1158 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 BDH2Q9BUT1 245 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RAD21L1Q9H4I0 556 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RIC8BQ9NVN3 520 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 VNN3Q9NY84 501 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RNF181Q9P0P0 153 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 VPS51Q9UID3 782 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 FKBPLQ9UIM3 349 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRG3Q9Y2Y8 225 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 G3V2T6 193 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 GNGT2O14610 69 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 EPHA2P29317 976 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CA5AP35218 305 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 HPCAL1P37235 193 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 MAGEA8P43361 318 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 SEMG2Q02383 582 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 SIM2Q14190 667 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF235Q14590 738 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 BRMS1LQ5PSV4 323 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 THAP5Q7Z6K1 395 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTRH1Q86Y79 214 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 STAG3L4Q8TBR4 150 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 NCLNQ969V3 563 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 KIAA1191Q96A73 305 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 FKBP10Q96AY3 582 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 LRRC3Q9BY71 257 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 FAM118AQ9NWS6 357 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 PSME2Q9UL46 239 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF232Q9UNY5 417 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ERGIC3Q9Y282 383 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 FTH1P02794 183 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 RPS17P08708 135 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 KCNQ1P51787 676 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 RPL38P63173 70 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 XKR7Q5GH72 579 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 GPRIN3Q6ZVF9 776 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF683Q8IZ20 524 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 C8orf59Q8N0T1 100 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 METTL6Q8TCB7 284 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CHPT1Q8WUD6 406 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 OSCP1Q8WVF1 389 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ISG20Q96AZ6 181 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABHD8Q96I13 439 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF583Q96ND8 569 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CGREF1Q99674 301 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 YIPF2Q9BWQ6 316 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZYG11BQ9C0D3 744 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 BAG5Q9UL15 447 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC30A1Q9Y6M5 507 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 GREB1Q4ZG55 1949 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 LOC285095A0A1B0GVY8 99 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF701M0R085 212 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 E2F3O00716 465 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 RAMP2O60895 175 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABCB7O75027 752 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 NDUFS3O75489 264 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ESRRBO95718 433 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 TSPAN12O95859 305 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRR35P0CG20 571 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 RCVRNP35243 200 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 NKX2-5P52952 324 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 NCS1P62166 190 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 EMX2Q04743 252 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF33AQ06730 810 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 FAM174BQ3ZCQ3 159 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF362Q5T0B9 420 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 IQSEC1Q6DN90 963 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 MSANTD2Q6P1R3 559 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CYP20A1Q6UW02 462 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 GCNT7Q6ZNI0 430 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZDHHC13Q8IUH4 622 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 HID1Q8IV36 788 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC7A5P1Q8MH63 180 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 FEM1AQ9BSK4 669 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCDC68Q9H2F9 335 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRDM5Q9NQX1 630 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 DNMT3BQ9UBC3 853 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 ADGRE2Q9UHX3 823 aa10.22□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDH23Q9H251 3354 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 A8MX80 341 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 E2F6O75461 281 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRAMEF12O95522 483 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 FCGR1AP12314 374 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDH1P12830 882 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ERVK-8P63133 956 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 CHRNB3Q05901 458 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 GRB14Q14449 540 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 AP5B1Q2VPB7 878 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZRANB3Q5FWF4 1079 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 PAGE2BQ5JRK9 111 aa10.21□□□□□ -0.77
CDC42SE1-207ENST00000540998 C6orf141Q5SZD1 244 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms