RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 INTS4Q96HW7 963 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 C9orf72Q96LT7 481 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 OR2M4Q96R27 311 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TUBGCP5Q96RT8 1024 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 JMJD8Q96S16 334 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TBCBQ99426 244 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SMAD5Q99717 465 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TSG101Q99816 390 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 NCAPGQ9BPX3 1015 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 PLCD4Q9BRC7 762 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 NUDT9Q9BW91 350 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 STN1Q9H668 368 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SUDS3Q9H7L9 328 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SARS2Q9NP81 518 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TMEM248Q9NWD8 314 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 GPR83Q9NYM4 423 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 C5AR2Q9P296 337 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 DNAI1Q9UI46 699 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 LNPEPQ9UIQ6 1025 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SLC17A4Q9Y2C5 497 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 COPG1Q9Y678 874 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 MAP1AP78559 2803 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 SVILO95425 2214 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 TRBV23OR9-2A0A075B6M9 112 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 FITM1A5D6W6 292 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 LILRA5A6NI73 299 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 DIAPH2O60879 1101 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 C9P02748 559 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ERBB2P04626 1255 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 PLEKP08567 350 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 PFKFB1P16118 471 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CAPN3P20807 821 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CMA1P23946 247 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CSNK1DP48730 415 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 POLD2P49005 469 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 POLR2LP62875 67 aaKnown RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CDK3Q00526 305 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 NFATC2Q13469 925 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 LAPTM5Q13571 262 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 IL10RAQ13651 578 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 LAMB3Q13751 1172 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ACOX1Q15067 660 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CYTH1Q15438 398 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 SLC14A2Q15849 920 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 PTPN20Q4JDL3 420 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 VWA5B1Q5TIE3 1220 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ATL3Q6DD88 541 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 RWDD4Q6NW29 188 aaKnown RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 IYDQ6PHW0 289 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 MED25Q71SY5 747 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ENOSF1Q7L5Y1 443 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 BNIPLQ7Z465 357 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ATG4DQ86TL0 474 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 SLC9B2Q86UD5 537 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 PPP1R3BQ86XI6 285 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ZSWIM9Q86XI8 627 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF761Q86XN6 746 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CAMK1DQ8IU85 385 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CBARPQ8N350 705 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ANKS4BQ8N8V4 417 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 AVL9Q8NBF6 648 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ABHD4Q8TB40 342 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 UBE2Q2Q8WVN8 375 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ECHDC3Q96DC8 303 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 NUS1Q96E22 293 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 KIRREL1Q96J84 757 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 FAM81BQ96LP2 452 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 COQ10AQ96MF6 247 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 FCRL4Q96PJ5 515 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 OR6C1Q96RD1 312 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 SPATA9Q9BWV2 254 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 GTPBP4Q9BZE4 634 aaKnown RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 RNF32Q9H0A6 362 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ATP13A3Q9H7F0 1226 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 UCK1Q9HA47 277 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 CHST11Q9NPF2 352 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 ACP6Q9NPH0 428 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 AGPAT4Q9NRZ5 378 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 COPG2Q9UBF2 871 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 LHX3Q9UBR4 397 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 OR12D3Q9UGF7 316 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 TMEFF2Q9UIK5 374 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 NEU3Q9UQ49 428 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 FARSAQ9Y285 508 aaKnown RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 B3GNT3Q9Y2A9 372 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 MED13LQ71F56 2210 aa4.54□□□□□ -1.68
SNHG1-214ENST00000540865 DIDO1Q9BTC0 2240 aaKnown RBP4.54□□□□□ -1.68
SNHG1-214ENST00000540865 KIR2DS5A0A0G2JLQ3 304 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 A0A0G2JNG1 304 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 A0A1B0GUH1 482 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 A6NL46 340 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 KIR2DS3K7RE56 304 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF185O15231 689 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PRODHO43272 600 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms