RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 WNT7AO00755 349 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 UBXN7O94888 489 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 AP3S2P59780 193 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF155Q12901 538 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SNAPC1Q16533 368 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 EIPR1Q53HC9 387 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ESRP1Q6NXG1 681 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 MSANTD2Q6P1R3 559 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZCCHC12Q6PEW1 402 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CD99L2Q8TCZ2 262 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DGCR14Q96DF8 476 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 C12orf42Q96LP6 360 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PPM1MQ96MI6 270 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 NUSAP1Q9BXS6 441 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ARHGEF4Q9NR80 690 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DMAC2Q9NW81 257 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ABI3Q9P2A4 366 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GRIN2DO15399 1336 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC30A4O14863 429 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 IDH3BO43837 385 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PGM3O95394 542 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ALDH4A1P30038 563 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 MPP1Q00013 466 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC1A5Q15758 541 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC5A9Q2M3M2 681 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SPRYD7Q5W111 196 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DNAJB7Q7Z6W7 309 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZZZ3Q8IYH5 903 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PSMA8Q8TAA3 256 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZBED6CLQ96FA7 236 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF514Q96K75 400 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF599Q96NL3 588 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TCF25Q9BQ70 676 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 UNC93B1Q9H1C4 597 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC28A3Q9HAS3 691 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 IGLV3-22A0A075B6J6 115 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 RIIAD1A6NNX1 92 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LYNP07948 512 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ANXA4P09525 319 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 THRBP10828 461 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 AVPR1BP47901 424 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ROR2Q01974 943 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GRSF1Q12849 480 aaKnown RBP eCLIP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LCN1P1Q5VSP4 162 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DAW1Q8N136 415 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ARL10Q8N8L6 244 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GSTCDQ8NEC7 633 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 VANGL1Q8TAA9 524 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PIGXQ8TBF5 258 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 C1GALT1C1Q96EU7 318 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LMLNQ96KR4 655 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TRNT1Q96Q11 434 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GPATCH1Q9BRR8 931 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TNKS2Q9H2K2 1166 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 FNIP2Q9P278 1114 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 IL36AQ9UHA7 158 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ARHGEF33A8MVX0 844 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SCELO95171 688 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ELNP15502 786 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 IDH3AP50213 366 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LSM3P62310 102 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DPYSL2Q16555 572 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ANKS1BQ7Z6G8 1248 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 MCFD2Q8NI22 146 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 XAGE5Q8WWM1 108 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 APOLD1Q96LR9 279 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CNOT6Q9ULM6 557 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 NUP188Q5SRE5 1749 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ABCC6O95255 1503 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SOWAHBA6NEL2 793 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 BTN3A3O00478 584 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 OR1F1O43749 312 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CYP4B1P13584 511 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CHRNB2P17787 502 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PTGIRP43119 386 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 RGS8P57771 180 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC10A6Q3KNW5 377 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TIGD2Q4W5G0 525 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SNAP47Q5SQN1 464 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SNX20Q7Z614 316 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GALNT5Q7Z7M9 940 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LIX1Q8N485 282 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 OR4C6Q8NH72 309 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 A0A1W2PQ72 361 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 RHPN2P1A8MT19 583 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 K7EPI3 171 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TRMUO75648 421 aaKnown RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PIAS1O75925 651 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CD247P20963 164 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 FAM91A1Q658Y4 838 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 FSTL4Q6MZW2 842 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TMEM220Q6QAJ8 160 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TAF8Q7Z7C8 310 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ATCAYQ86WG3 371 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ATAD1Q8NBU5 361 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SLC38A4Q969I6 547 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SLC22A18Q96BI1 424 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms