RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 NLE1Q9NVX2 485 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TANC1Q9C0D5 1861 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ASPDHA6ND91 283 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 NDST3O95803 873 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 KLKB1P03952 638 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 SERPINF2P08697 491 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 GSTT2P0CG29 244 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 GSTT2BP0CG30 244 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 CLCQ05315 142 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 RING1Q06587 406 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM236Q5W0B7 351 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 PSAPL1Q6NUJ1 521 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM117BQ6P1L5 589 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 PRSS55Q6UWB4 352 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TOP1MTQ969P6 601 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 WBP2Q969T9 261 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 FUBP1Q96AE4 644 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 DUS3LQ96G46 650 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TFB2MQ9H5Q4 396 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 NANOGQ9H9S0 305 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ITM2CQ9NQX7 267 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ARMC1Q9NVT9 282 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 PCDHGC4Q9Y5F7 938 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 CA12O43570 354 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 XPNPEP2O43895 674 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 INMTO95050 263 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 TSPAN12O95859 305 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC11A1P49279 550 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 HK3P52790 923 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 DGKQP52824 942 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 GPR17Q13304 367 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 TNIP2Q8NFZ5 429 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 KIAA1191Q96A73 305 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 CCDC97Q96F63 343 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 MYRFLQ96LU7 910 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 GPR21Q99679 349 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 SPON2Q9BUD6 331 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 MRPL40Q9NQ50 206 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNHIT2Q9UHR6 403 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 NPEPPSL1A6NEC2 478 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 SUPT3HB4E1H0 165 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 RHOBTB1O94844 696 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 LDLRP01130 860 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 ITGB6P18564 788 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 CR2P20023 1033 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 OGNP20774 298 aaKnown RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 DCKP27707 260 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 C5orf22Q49AR2 442 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 ELMO1Q92556 727 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 PEX13Q92968 403 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC35B4Q969S0 331 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 CASD1Q96PB1 797 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 KLHL25Q9H0H3 589 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 SDR39U1Q9NRG7 319 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 GID8Q9NWU2 228 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 ABCD2Q9UBJ2 740 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 ANAPC2Q9UJX6 822 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 NUP214P35658 2090 aaPredicted RBP12.4□□□□□ -0.42
SFSWAP-208ENST00000539506 F5H5T6 163 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 KERAO60938 352 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 RASAL1O95294 804 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 F11P03951 625 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 INHBBP09529 407 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 CYP4B1P13584 511 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 PIK3CGP48736 1102 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 PLA2G16P53816 162 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 PAGE2BQ5JRK9 111 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 SYVN1Q86TM6 617 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 KIAA2013Q8IYS2 634 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 OR2T11Q8NH01 316 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 FIG4Q92562 907 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 RMDN1Q96DB5 314 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 SPATA17Q96L03 361 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 PSKH2Q96QS6 385 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 ALOXE3Q9BYJ1 711 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 DERL2Q9GZP9 239 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 MARCH7Q9H992 704 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 POPDC3Q9HBV1 291 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 GKN1Q9NS71 199 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 WDR70Q9NW82 654 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 RNF112Q9ULX5 631 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 GPR45Q9Y5Y3 372 aa12.4□□□□□ -0.43
SFSWAP-208ENST00000539506 H0Y858 1186 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 KDM1AO60341 852 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 CD160O95971 181 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 RFC2P35250 354 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 PIGAP37287 484 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 IFITM3Q01628 133 aa12.39□□□□□ -0.43
SFSWAP-208ENST00000539506 CTSL3PQ5NE16 218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms