RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CFAP20Q9Y6A4 193 aaKnown RBP15.35■□□□□ 0.05
CIT-210ENST00000539413 KIF26BQ2KJY2 2108 aa15.35■□□□□ 0.05
CIT-210ENST00000539413 PKD1L2Q7Z442 2459 aa15.35■□□□□ 0.05
CIT-210ENST00000539413 KNTC1P50748 2209 aa15.35■□□□□ 0.05
CIT-210ENST00000539413 APC2O95996 2303 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 ITPR1Q14643 2758 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 ADRA1DP25100 572 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 FOXN2P32314 431 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 CSTF2P33240 577 aaKnown RBP eCLIP15.34■□□□□ 0.05
CIT-210ENST00000539413 GFERP55789 205 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 CLN3Q13286 438 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 DBN1Q16643 649 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 TSTD2Q5T7W7 516 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 DUS1LQ6P1R4 473 aaKnown RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 TTC27Q6P3X3 843 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 C4orf22Q6V702 233 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 ARHGAP22Q7Z5H3 698 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 CFAP206Q8IYR0 622 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 CLDN19Q8N6F1 224 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 JPH3Q8WXH2 748 aaPredicted RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 PBKQ96KB5 322 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 INSM2Q96T92 566 aaPredicted RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 PRORYQ9H606 182 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 EIF2B3Q9NR50 452 aaKnown RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 IMP3Q9NV31 184 aaKnown RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 OCIAD1Q9NX40 245 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 ACSL6Q9UKU0 697 aa15.34■□□□□ 0.05
CIT-210ENST00000539413 DSPP15924 2871 aaKnown RBP15.34■□□□□ 0.05
CIT-210ENST00000539413 KLHL33A6NCF5 533 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 POLBP06746 335 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 MTHFD1P11586 935 aaKnown RBP15.33■□□□□ 0.04
CIT-210ENST00000539413 AMD1P17707 334 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 CXADRP78310 365 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 TGIF1Q15583 401 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 TRIP13Q15645 432 aaPredicted RBP15.33■□□□□ 0.04
CIT-210ENST00000539413 BROXQ5VW32 411 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 ZFAND4Q86XD8 727 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 FAM129CQ86XR2 697 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 PLXDC1Q8IUK5 500 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 HM13Q8TCT9 377 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 RSC1A1Q92681 617 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 HDAC10Q969S8 669 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 FCRL3Q96P31 734 aaPredicted RBP15.33■□□□□ 0.04
CIT-210ENST00000539413 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 SMARCAL1Q9NZC9 954 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
CIT-210ENST00000539413 ACSL5Q9ULC5 683 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 TCAF1Q9Y4C2 921 aa15.33■□□□□ 0.04
CIT-210ENST00000539413 MN1Q10571 1320 aaPredicted RBP15.33■□□□□ 0.04
CIT-210ENST00000539413 ANKRD11Q6UB99 2663 aaPredicted RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 C17orf113A0A1B0GUU1 675 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 EFCAB7A8K855 629 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 GOT2P00505 430 aaKnown RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 C9P02748 559 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 SLC35G4P0C7Q5 338 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 CAPZBP47756 277 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 LEPRP48357 1165 aaKnown RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 VPS41P49754 854 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 TERF1P54274 439 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 ACVR1Q04771 509 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 LAMB3Q13751 1172 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 TMEM164Q5U3C3 297 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 BMPERQ8N8U9 685 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 PPHLN1Q8NEY8 458 aaKnown RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 COG1Q8WTW3 980 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 ART4Q93070 314 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 C9orf72Q96LT7 481 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 RMDN2Q96LZ7 410 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 C12orf66Q96MD2 445 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 TGM7Q96PF1 710 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 TAAR9Q96RI9 348 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 CCM2Q9BSQ5 444 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 CPNE5Q9HCH3 593 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 WDR70Q9NW82 654 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 SLC39A1Q9NY26 324 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 RIMKLBQ9ULI2 386 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 TTC7AQ9ULT0 858 aaPredicted RBP15.32■□□□□ 0.04
CIT-210ENST00000539413 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 PRSS21Q9Y6M0 314 aa15.32■□□□□ 0.04
CIT-210ENST00000539413 UNC13CQ8NB66 2214 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 TCRBV7S3A2A0A539 114 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 USP27XA6NNY8 438 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 CAPN5O15484 640 aaPredicted RBP15.31■□□□□ 0.04
CIT-210ENST00000539413 KIF5CO60282 957 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 LIPCP11150 499 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 NSG1P42857 185 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 TMPRSS3P57727 454 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 CRADDP78560 199 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 ITIH4Q14624 930 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 ZNF658BQ4V348 819 aaPredicted RBP15.31■□□□□ 0.04
CIT-210ENST00000539413 PCID2Q5JVF3 399 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 CAPRIN2Q6IMN6 1127 aaKnown RBP15.31■□□□□ 0.04
CIT-210ENST00000539413 AFTPHQ6ULP2 937 aa15.31■□□□□ 0.04
CIT-210ENST00000539413 ZNF534Q76KX8 674 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms