RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF514Q96K75 400 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ARHGAP9Q9BRR9 750 aa18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ZPBPQ9BS86 351 aa18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SPRY4Q9C004 299 aa18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 WWP1Q9H0M0 922 aa18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ARNT2Q9HBZ2 717 aa18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 IMP3Q9NV31 184 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 PIH1D1Q9NWS0 290 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SIDT1Q9NXL6 827 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ZNF106Q9H2Y7 1883 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-212ENST00000539372 MGAT4DA6NG13 374 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 LDB2O43679 373 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ZNF189O75820 626 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 STK17BO94768 372 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ITGB2P05107 769 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ITGALP20701 1170 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 PLCL1Q15111 1095 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 TBR1Q16650 682 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 CACHD1Q5VU97 1274 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 METRNLQ641Q3 311 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 KCTD11Q693B1 232 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 DUS1LQ6P1R4 473 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 TIPARPQ7Z3E1 657 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 KLHDC8BQ8IXV7 354 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 UNC5BQ8IZJ1 945 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SLC35B2Q8TB61 432 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ULK4Q96C45 1275 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 LRRC45Q96CN5 670 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ZDHHC12Q96GR4 267 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ELMO2Q96JJ3 720 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 DNAJC1Q96KC8 554 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 INSM2Q96T92 566 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SLC12A9Q9BXP2 914 aa18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ZNF768Q9H5H4 540 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 FEZ2Q9UHY8 353 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SGTAO43765 313 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 FAM87AP0C7U9 286 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 MTHFD1P11586 935 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 PLA2G2AP14555 144 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 MC4RP32245 332 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 HADHAP40939 763 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 CDKN1CP49918 316 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SEPT6Q14141 434 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 BCL7AQ4VC05 210 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 XKR5Q6UX68 686 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 PRSS42Q7Z5A4 293 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SNX20Q7Z614 316 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 NXPE1Q8N323 547 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 LILRA3Q8N6C8 439 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 SPDYE1Q8NFV5 336 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 OR2L2Q8NH16 312 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 ATG4AQ8WYN0 398 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 C12orf66Q96MD2 445 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 OR6C1Q96RD1 312 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 LRRC40Q9H9A6 602 aa18.65■□□□□ 0.58
TNFRSF1A-212ENST00000539372 LOC101059948A0A1B0GTJ6 334 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TOX3O15405 576 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 POLBP06746 335 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RALBP11234 206 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 MAP4P27816 1152 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 POU6F1Q14863 301 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 P3H1Q32P28 736 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZRANB3Q5FWF4 1079 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CFAP206Q8IYR0 622 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 COPS8Q99627 209 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ULBP3Q9BZM4 244 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GPN2Q9H9Y4 310 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ACSL5Q9ULC5 683 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GUCA1BQ9UMX6 200 aa18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TMEM184BQ9Y519 407 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CCDC78A2IDD5 438 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 AGAP14A8MT82 685 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GOLGA6L6A8MZA4 724 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 DLGAP3O95886 979 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SLC35G4P0C7Q5 338 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PRSS56P0CW18 603 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ATP1B2P14415 290 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZNF28P17035 718 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TAS2R42Q7RTR8 314 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RNF10Q8N5U6 811 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KLHL6Q8WZ60 621 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 LINC00615Q96LM1 132 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RMDN2Q96LZ7 410 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RAB33BQ9H082 229 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CFAP46Q8IYW2 2715 aa18.63■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PIEZO2Q9H5I5 2752 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CFAP99D6REC4 459 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 AP2A1O95782 977 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PRLHRP49683 370 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 NFATC3Q12968 1075 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GSE1Q14687 1217 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SEL1L2Q5TEA6 688 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KLHL35Q6PF15 583 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RASGRP3Q8IV61 690 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KIAA1143Q96AT1 154 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TSGA10Q9BZW7 698 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 NLE1Q9NVX2 485 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 IL17BQ9UHF5 180 aa18.62■□□□□ 0.57
TNFRSF1A-212ENST00000539372 IGHV5-51A0A0C4DH38 117 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms