RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MMP27Q9H306 513 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 EPS8L2Q9H6S3 715 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 KAT8Q9H7Z6 458 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 ACTR8Q9H981 624 aa18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 MARCH4Q9P2E8 410 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-207ENST00000538548 RAD51BO15315 384 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 GUCY1B2O75343 617 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 USP17L7P0C7H9 530 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 DCTP40126 519 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 SEPHS1P49903 392 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 MVKQ03426 396 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 FPGSQ05932 587 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 RAPSNQ13702 412 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 ATP6AP1LQ52LC2 224 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 VARS2Q5ST30 1063 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 MFSD4BQ5TF39 518 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 KDELC1Q6UW63 502 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 AGMOQ6ZNB7 445 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 ABI1Q8IZP0 508 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 OR8J3Q8NGG0 315 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 GIPC2Q8TF65 315 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 OR2B2Q9GZK3 357 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 EVLQ9UI08 416 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 NEU3Q9UQ49 428 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 A6NL46 340 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 ARNTLO00327 626 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 RECQL4O94761 1208 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 TXNP10599 105 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 UROSP10746 265 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 ITGAMP11215 1152 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 MASP1P48740 699 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 TRPC1P48995 793 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 YWHAHQ04917 246 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 FADDQ13158 208 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 SV2CQ496J9 727 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 CCDC81Q6ZN84 652 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 B3GNT8Q7Z7M8 397 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 FBXO39Q8N4B4 442 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 OR2T12Q8NG77 320 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 POPDC3Q9HBV1 291 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 LIMD1Q9UGP4 676 aa18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 TMEFF2Q9UIK5 374 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-207ENST00000538548 AGAP5A6NIR3 686 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 GABRDO14764 452 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 GSTA4O15217 222 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 SUOXP51687 545 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 ARSDP51689 593 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 RABGGTBP53611 331 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 CXCR4P61073 352 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TIAL1Q01085 375 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 ZNF404Q494X3 552 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 DESI1Q6ICB0 168 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TIGD7Q6NT04 549 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 ZNF549Q6P9A3 640 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 OR2T11Q8NH01 316 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 EDEM1Q92611 657 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 C17orf80Q9BSJ5 609 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 EMILIN2Q9BXX0 1053 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC39A8Q9C0K1 460 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 SPATC1LQ9H0A9 340 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 ATP13A1Q9HD20 1204 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 SCN3BQ9NY72 215 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 ADGRE2Q9UHX3 823 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 CLDN24A6NM45 220 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 SUPT3HB4E1H0 165 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 IDH3BO43837 385 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 KERAO60938 352 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 RPS17P08708 135 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TUBA1BP68363 451 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 PLEKHG6Q3KR16 790 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 C6orf136Q5SQH8 315 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 RSBN1Q5VWQ0 802 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TUBA1AQ71U36 451 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 GPRIN1Q7Z2K8 1008 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 TOP6BLQ8N6T0 577 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 FNDC5Q8NAU1 212 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 PROX1Q92786 737 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 RPL3LQ92901 407 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 RNF34Q969K3 372 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 CEP44Q9C0F1 390 aa18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 EIF3LQ9Y262 564 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-207ENST00000538548 PABPN1LA6NDY0 278 aaKnown RBP18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 MROH6A6NGR9 719 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 CCL22O00626 93 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 FTH1P02794 183 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 KRT8P05787 483 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 PRKACGP22612 351 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 FMO3P31513 532 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 KRR1Q13601 381 aaKnown RBP18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 PWP1Q13610 501 aa18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 TRIP4Q15650 581 aaPredicted RBP18.33■□□□□ 0.53
SFSWAP-207ENST00000538548 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms