RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DGKAP23743 735 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 IL12AP29459 219 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 PTPN5P54829 565 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 PHKG1Q16816 387 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 MYLK3Q32MK0 819 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 MAP7D1Q3KQU3 841 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 PAGE3Q5JUK9 113 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-208ENST00000538333 C22orf39Q6P5X5 142 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 SFRP1Q8N474 314 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 ZBTB2Q8N680 514 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 PAF1Q8N7H5 531 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 OR2T34Q8NGX1 318 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 OR2T3Q8NH03 318 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 SLC22A17Q8WUG5 538 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 LRTOMTQ8WZ04 291 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 VPS33AQ96AX1 596 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 MCCC1Q96RQ3 725 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-208ENST00000538333 FAM126AQ9BYI3 521 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-208ENST00000538333 TRIM54Q9BYV2 358 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 LATS2Q9NRM7 1088 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 ZIM2Q9NZV7 527 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 CXCL14O95715 111 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 LHCGRP22888 699 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 HSPA7P48741 367 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 CHN2P52757 468 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 KCNK10P57789 538 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 SEMG2Q02383 582 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 SPATS1Q496A3 300 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ATP6AP1LQ52LC2 224 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 LRRC66Q68CR7 880 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 FNDC5Q8NAU1 212 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 METTL6Q8TCB7 284 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 PROKR1Q8TCW9 393 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 TMEM125Q96AQ2 219 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 SUV39H2Q9H5I1 410 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ASAH2Q9NR71 780 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 AP4B1Q9Y6B7 739 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 C15orf38-AP3S2A0A0A6YYH1 394 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 SYNCRIPO60506 623 aaKnown RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 BAIAP3O94812 1187 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 GUCA1CO95843 209 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 OTCP00480 354 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 S100BP04271 92 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ADH1AP07327 375 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 GRIA3P42263 894 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 POLR2JP52435 117 aaKnown RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 PTSQ03393 145 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 HMBOX1Q6NT76 420 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 OTOP2Q7RTS6 562 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ARPINQ7Z6K5 226 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ELMOD1Q8N336 334 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 CHCHD4Q8N4Q1 142 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 TMEM199Q8N511 208 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 KLHL23Q8NBE8 558 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 CANT1Q8WVQ1 401 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 TMEM79Q9BSE2 394 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 CPEB1Q9BZB8 566 aaKnown RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 IPPKQ9H8X2 491 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 ARMC1Q9NVT9 282 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 UBAP1Q9NZ09 502 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 CNOT6Q9ULM6 557 aaKnown RBP13.79□□□□□ -0.2
LIMK1-208ENST00000538333 SUFUQ9UMX1 484 aa13.79□□□□□ -0.2
LIMK1-208ENST00000538333 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 AQP12BA6NM10 295 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ZNF839A8K0R7 811 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 KIAA0355O15063 1070 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CCL16O15467 120 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CSPG5O95196 566 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CCNHP51946 323 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CDKL1Q00532 357 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 BNIP2Q12982 314 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 LCN8Q6JVE9 175 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 IL27RAQ6UWB1 636 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 TMEM25Q86YD3 366 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 AQP12AQ8IXF9 295 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 PIP4K2CQ8TBX8 421 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 UBTD2Q8WUN7 234 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CLP1Q92989 425 aaKnown RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 TRIM8Q9BZR9 551 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 YIPF3Q9GZM5 350 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 SEMA6AQ9H2E6 1030 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 Q9H521 79 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CCL27Q9Y4X3 112 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 NOTCH4Q99466 2003 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 H0YJX3 145 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ANKRD28O15084 1053 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 NSG1P42857 185 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms