RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CMTR2Q8IYT2 770 aaKnown RBP9.12□□□□□ -0.95
DDB1-211ENST00000538280 OR2T11Q8NH01 316 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 UBTD2Q8WUN7 234 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 ACDQ96AP0 544 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 TMEM125Q96AQ2 219 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 PBXIP1Q96AQ6 731 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 LMLNQ96KR4 655 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 GBP5Q96PP8 586 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 LYSMD1Q96S90 227 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 HGH1Q9BTY7 390 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 LRRC3Q9BY71 257 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 BPIFA1Q9NP55 256 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 LATS2Q9NRM7 1088 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 CCM2LQ9NUG4 571 aaPredicted RBP9.12□□□□□ -0.95
DDB1-211ENST00000538280 RIC8BQ9NVN3 520 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 GID8Q9NWU2 228 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 UBAP1Q9NZ09 502 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 CNOT6Q9ULM6 557 aaKnown RBP9.12□□□□□ -0.95
DDB1-211ENST00000538280 PADI4Q9UM07 663 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
DDB1-211ENST00000538280 PKP3Q9Y446 797 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 ASB1Q9Y576 335 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 TIMM22Q9Y584 194 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 CPQQ9Y646 472 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 SLC30A1Q9Y6M5 507 aa9.12□□□□□ -0.95
DDB1-211ENST00000538280 PLXNB3Q9ULL4 1909 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 FAM234BA2RU67 622 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 C7orf72A4D263 438 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 OR7A17O14581 309 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ANGPT2O15123 496 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SNX2O60749 519 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ZNF821O75541 412 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 OR4F21O95013 312 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 CHEK2O96017 543 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 NPPAP01160 153 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 URODP06132 367 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ALPIP09923 528 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 BMP2P12643 396 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ZNF7P17097 686 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 CA5AP35218 305 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ATXN3P54252 364 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 DIO3P55073 304 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 EEFSECP57772 596 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 MYBPC1Q00872 1141 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ECT2LQ008S8 904 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 TRAF3Q13114 568 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 APOFQ13790 326 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SMAD2Q15796 467 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 TAF12Q16514 161 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 CRY1Q16526 586 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 VPS26BQ4G0F5 336 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 C6orf136Q5SQH8 315 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 RETSATQ6NUM9 610 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 METTL2BQ6P1Q9 378 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 LAYNQ6UX15 382 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 MACC1Q6ZN28 852 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 PRR23BQ6ZRT6 265 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 Q6ZSR9 355 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 HTR3DQ70Z44 454 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ERMP1Q7Z2K6 904 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 GOLGA7Q7Z5G4 137 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SERPINA9Q86WD7 417 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 APCDD1Q8J025 514 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 RBFAQ8N0V3 343 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 DPP10Q8N608 796 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 PACRGLQ8N7B6 248 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ARL14EPQ8N8R7 260 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 PAPD5Q8NDF8 572 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 LKAAEAR1Q8TD35 194 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ZFAND2BQ8WV99 257 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 LRTOMTQ8WZ04 291 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ISG20Q96AZ6 181 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 LRRC58Q96CX6 371 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 TMEM169Q96HH4 297 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SAMD11Q96NU1 681 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SLC39A3Q9BRY0 314 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 CENPKQ9BS16 269 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 C2orf49Q9BVC5 232 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 TRIM15Q9C019 465 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-211ENST00000538280 ABCB8Q9NUT2 735 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SMPD4Q9NXE4 827 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 CD274Q9NZQ7 290 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 NDUFA13Q9P0J0 144 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ACTR3BQ9P1U1 418 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 KLHL42Q9P2K6 505 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 EIF2B4Q9UI10 523 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 GNPTGQ9UJJ9 305 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 LEF1Q9UJU2 399 aaPredicted RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 PTBP2Q9UKA9 531 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 APPL1Q9UKG1 709 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 ZNF510Q9Y2H8 683 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 OARD1Q9Y530 152 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms