RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SMTNL2Q2TAL5 461 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 VWA2Q5GFL6 755 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 ACAD10Q6JQN1 1059 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 TRAM1L1Q8N609 369 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 GPR26Q8NDV2 337 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 DNAJB14Q8TBM8 379 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 HSPH1Q92598 858 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 CNDP1Q96KN2 507 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 PPM1MQ96MI6 270 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 NUP85Q9BW27 656 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 IMP3Q9NV31 184 aaKnown RBP10.86□□□□□ -0.67
CLPB-208ENST00000538021 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 RBM22Q9NW64 420 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLPB-208ENST00000538021 P4HTMQ9NXG6 502 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 TAB2Q9NYJ8 693 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 RPL26L1Q9UNX3 145 aaKnown RBP10.86□□□□□ -0.67
CLPB-208ENST00000538021 PTRH2Q9Y3E5 179 aaKnown RBP10.86□□□□□ -0.67
CLPB-208ENST00000538021 PCNX1Q96RV3 2341 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 FER1L5A0AVI2 2057 aa10.86□□□□□ -0.67
CLPB-208ENST00000538021 MYO7BQ6PIF6 2116 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 A0A1W2PQJ5 194 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 OR6C74A6NCV1 312 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 SLC9B1P1A6NJY1 282 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 TMCO5BA8MYB1 307 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 ANKRD66B4E2M5 251 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 VEGFDO43915 354 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 GADD45BO75293 160 aaPredicted RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 KLF7O75840 302 aaPredicted RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 IGHEP01854 428 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 BPIP17213 487 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 CDH3P22223 829 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 CES1P23141 567 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 TSFMP43897 325 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 PREPP48147 710 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 ZNF165P49910 485 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 KPNA2P52292 529 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 ADCY2Q08462 1091 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 GTF2H3Q13889 308 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 TESK1Q15569 626 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 KHDC1Q4VXA5 237 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 FAM180AQ6UWF9 173 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 SPNS3Q6ZMD2 512 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 POLNQ7Z5Q5 900 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 MRGPRGQ86SM5 289 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLPB-208ENST00000538021 OR1L3Q8NH93 324 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 GDAP1Q8TB36 358 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 PPP4R1Q8TF05 950 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 ITLN2Q8WWU7 325 aaPredicted RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 EID2BQ96D98 161 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 GBP5Q96PP8 586 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 CSPG4P5Q96PW8 444 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 DHRS4Q9BTZ2 278 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 ZFYVE1Q9HBF4 777 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 SAMSN1Q9NSI8 373 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 SUCOQ9UBS9 1254 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 GPN3Q9UHW5 284 aaPredicted RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 SHOC2Q9UQ13 582 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 BTRCQ9Y297 605 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 CFAP20Q9Y6A4 193 aaKnown RBP10.85□□□□□ -0.67
CLPB-208ENST00000538021 NAV3Q8IVL0 2385 aa10.85□□□□□ -0.67
CLPB-208ENST00000538021 JRKO75564 520 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 FOLR3P41439 243 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 KCNK10P57789 538 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 TMEM115Q12893 351 aaPredicted RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 XRCC4Q13426 336 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 GALNT3Q14435 633 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 ZNF169Q14929 603 aaPredicted RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 DPYSL2Q16555 572 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 CYP2A13Q16696 494 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 ZNF630Q2M218 657 aaPredicted RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 ZNF789Q5FWF6 425 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 TCP11X2Q5H9J9 407 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 BNC2Q6ZN30 1099 aaPredicted RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 C11orf96Q7Z7L8 435 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 AMZ2Q86W34 360 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 RELTQ969Z4 430 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 TTC25Q96NG3 672 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 DPH2Q9BQC3 489 aaPredicted RBP10.84□□□□□ -0.67
CLPB-208ENST00000538021 TRIM8Q9BZR9 551 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLPB-208ENST00000538021 OLAHQ9NV23 265 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 HAUS2Q9NVX0 235 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 TAS2R14Q9NYV8 317 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 SERTAD3Q9UJW9 196 aa10.84□□□□□ -0.67
CLPB-208ENST00000538021 SEC16AO15027 2179 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 TRGV8A0A0C4DH27 118 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 TMEM191CA6NGB0 347 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 E7EQ34 232 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 ZNF749O43361 778 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 POP7O75817 140 aaKnown RBP10.83□□□□□ -0.68
CLPB-208ENST00000538021 HLA-DQB2P05538 268 aa10.83□□□□□ -0.68
CLPB-208ENST00000538021 PIRTP0C851 137 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms