RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FOXA1P55317 472 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 KCNK10P57789 538 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 BNIP2Q12982 314 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 SP140Q13342 867 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 GTF2H2Q13888 395 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 GTF2H2CQ6P1K8 395 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ATP6V1E2Q96A05 226 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 Q9H521 79 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 ZDHHC6Q9H6R6 413 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 BRD9Q9H8M2 597 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 EIF2B4Q9UI10 523 aaKnown RBP13.38□□□□□ -0.27
SMG6-203ENST00000536871 ANGPTL3Q9Y5C1 460 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 GPR45Q9Y5Y3 372 aa13.38□□□□□ -0.27
SMG6-203ENST00000536871 A0A1W2PP18 115 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 LRRC14BA6NHZ5 514 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 PPP6CO00743 305 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 MOSPD3O75425 235 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 C8BP07358 591 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 C8GP07360 202 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 MPC1LP0DKB6 136 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 MAPK9P45984 424 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 SPINT3P49223 89 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 AGTR2P50052 363 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 OGFRL1Q5TC84 451 aaPredicted RBP13.37□□□□□ -0.27
SMG6-203ENST00000536871 PAOXQ6QHF9 649 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 DPY19L3Q6ZPD9 716 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 GPR26Q8NDV2 337 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 BHLHE22Q8NFJ8 381 aaPredicted RBP13.37□□□□□ -0.27
SMG6-203ENST00000536871 METTL6Q8TCB7 284 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 GDPD5Q8WTR4 605 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 PPP3R2Q96LZ3 170 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 ABCD2Q9UBJ2 740 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 GBF1Q92538 1859 aa13.37□□□□□ -0.27
SMG6-203ENST00000536871 ZNF106Q9H2Y7 1883 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 IQCF5A8MTL0 148 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 E7ENX8 843 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 NR5A2O00482 541 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ANXA5P08758 320 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 HSD17B1P14061 328 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 HMOX2P30519 316 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 VIPR1P32241 457 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 RHDQ02161 417 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 PTSQ03393 145 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 EMX2Q04743 252 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 RCAN2Q14206 197 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 TRIP10Q15642 601 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 PRSS36Q5K4E3 855 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 PLEKHS1Q5SXH7 462 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 GOLGA7Q7Z5G4 137 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ICA1LQ8NDH6 482 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 ZUFSPQ96AP4 578 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 DCUN1D1Q96GG9 259 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 KCNA7Q96RP8 456 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 TSC22D3Q99576 134 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 EGFL8Q99944 293 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 NTMT1Q9BV86 223 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 NOL11Q9H8H0 719 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 FBRSL1Q9HCM7 1045 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 HCFC1R1Q9NWW0 138 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 TRPS1Q9UHF7 1281 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 CNOT11Q9UKZ1 510 aaKnown RBP13.36□□□□□ -0.27
SMG6-203ENST00000536871 CCL26Q9Y258 94 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 FAM234BA2RU67 622 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 K7EPI3 171 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 SLC28A1O00337 649 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 NUAK1O60285 661 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 DNAJA2O60884 412 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 SLC22A3O75751 556 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 OR4F21O95013 312 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 UGT2B4P06133 528 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 EBLN1P0CF75 366 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 UGT1A6P19224 532 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 UGT1A1P22309 533 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 UGT1A4P22310 534 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 GKP32189 559 aa13.36□□□□□ -0.27
SMG6-203ENST00000536871 UGT1A3P35503 534 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms