RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 COPS8Q99627 209 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 DPYSL5Q9BPU6 564 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 C19orf43Q9BQ61 176 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-206ENST00000536398 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 ZDHHC3Q9NYG2 299 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 PRSS21Q9Y6M0 314 aa13.98□□□□□ -0.17
UBE3B-206ENST00000536398 IGLV3-16A0A075B6K0 115 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 TCRBV7S3A2A0A539 114 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 EFCAB7A8K855 629 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 LEPRP48357 1165 aaKnown RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 PPP1CAP62136 330 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 CXADRP78310 365 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 CRADDP78560 199 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 CACNG1Q06432 222 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 DBN1Q16643 649 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 TTC27Q6P3X3 843 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 GSTA5Q7RTV2 222 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 FAM129CQ86XR2 697 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 AVL9Q8NBF6 648 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 AGBL5Q8NDL9 886 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 MAIP1Q8WWC4 291 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 RSC1A1Q92681 617 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 ART4Q93070 314 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 HDAC10Q969S8 669 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 LINC00615Q96LM1 132 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 TGM7Q96PF1 710 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 AP1M1Q9BXS5 423 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 DPH1Q9BZG8 443 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 POT1Q9NUX5 634 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 AKAP7Q9P0M2 348 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
UBE3B-206ENST00000536398 SMG1Q96Q15 3661 aaKnown RBP13.97□□□□□ -0.17
UBE3B-206ENST00000536398 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 EFSO43281 561 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 KIF1CO43896 1103 aaKnown RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 RALBP11234 206 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 AMD1P17707 334 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 FOXN2P32314 431 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 CSTF2P33240 577 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 HALP42357 657 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 PRLHRP49683 370 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 BASP1P80723 227 aaKnown RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 ZNF658BQ4V348 819 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 ARHGAP40Q5TG30 622 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 RASGEF1CQ8N431 466 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 BMPERQ8N8U9 685 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 COG1Q8WTW3 980 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 RNF31Q96EP0 1072 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 FCRL3Q96P31 734 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 BBC3Q96PG8 261 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 NRTNQ99748 197 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 CTRCQ99895 268 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 IMP3Q9NV31 184 aaKnown RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 TTC7AQ9ULT0 858 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-206ENST00000536398 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 B3GALT1Q9Y5Z6 326 aa13.96□□□□□ -0.17
UBE3B-206ENST00000536398 PTPRQQ9UMZ3 2332 aa13.96□□□□□ -0.18
UBE3B-206ENST00000536398 HEATR9A2RTY3 570 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 USP27XA6NNY8 438 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 CFAP99D6REC4 459 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 OR1I1O60431 355 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
UBE3B-206ENST00000536398 C9P02748 559 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 MTHFD1P11586 935 aaKnown RBP13.95□□□□□ -0.18
UBE3B-206ENST00000536398 ADRA1DP25100 572 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 VPS41P49754 854 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 SEMA3AQ14563 771 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 SOWAHCQ53LP3 525 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-206ENST00000536398 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 CAPRIN2Q6IMN6 1127 aaKnown RBP13.95□□□□□ -0.18
UBE3B-206ENST00000536398 NAPRTQ6XQN6 538 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 ZNF534Q76KX8 674 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 PLXDC1Q8IUK5 500 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 HEXDCQ8WVB3 486 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 PBKQ96KB5 322 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 C9orf72Q96LT7 481 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 C12orf66Q96MD2 445 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 TAAR9Q96RI9 348 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 RANBP9Q96S59 729 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 CCM2Q9BSQ5 444 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 EPB41L1Q9H4G0 881 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 APMAPQ9HDC9 416 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
UBE3B-206ENST00000536398 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 ACSL5Q9ULC5 683 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 TCAF1Q9Y4C2 921 aa13.95□□□□□ -0.18
UBE3B-206ENST00000536398 MN1Q10571 1320 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-206ENST00000536398 MGAQ8IWI9 3026 aa13.94□□□□□ -0.18
UBE3B-206ENST00000536398 ZNF185O15231 689 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms