RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 JAMLQ86YT9 394 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 PRELID2Q8N945 189 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 OR10G6Q8NH81 332 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 TMEM159Q96B96 161 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 CDKN2AIPNLQ96HQ2 116 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 MS4A14Q96JA4 679 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 RMDN2Q96LZ7 410 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 CMKLR1Q99788 373 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 TUBB2BQ9BVA1 445 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 L2HGDHQ9H9P8 463 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 UCK1Q9HA47 277 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 SLC40A1Q9NP59 571 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 CASS4Q9NQ75 786 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 RAB6BQ9NRW1 208 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 POT1Q9NUX5 634 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 SMARCAL1Q9NZC9 954 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 TTC7AQ9ULT0 858 aaPredicted RBP16.06■□□□□ 0.16
ATL3-202ENST00000535789 CFAP20Q9Y6A4 193 aaKnown RBP16.06■□□□□ 0.16
ATL3-202ENST00000535789 BOD1L1Q8NFC6 3051 aa16.06■□□□□ 0.16
ATL3-202ENST00000535789 CFAP46Q8IYW2 2715 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 NVLO15381 856 aaKnown RBP16.05■□□□□ 0.16
ATL3-202ENST00000535789 CEP104O60308 925 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 VIPP01282 170 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 C9P02748 559 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 SPTBP11277 2137 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 FOXN2P32314 431 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 HADHAP40939 763 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 CDH17Q12864 832 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 TRA2AQ13595 282 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATL3-202ENST00000535789 RPE65Q16518 533 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 DBN1Q16643 649 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 SNAP47Q5SQN1 464 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 METRNLQ641Q3 311 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 TTC27Q6P3X3 843 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 SERPINA9Q86WD7 417 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 ZFAND4Q86XD8 727 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
ATL3-202ENST00000535789 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 STYXQ8WUJ0 223 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 NCSTNQ92542 709 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 CAPZA3Q96KX2 299 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 LINC00615Q96LM1 132 aaPredicted RBP16.05■□□□□ 0.16
ATL3-202ENST00000535789 FCRL3Q96P31 734 aaPredicted RBP16.05■□□□□ 0.16
ATL3-202ENST00000535789 STN1Q9H668 368 aaKnown RBP16.05■□□□□ 0.16
ATL3-202ENST00000535789 FAM8A1Q9UBU6 413 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 FER1L5A0AVI2 2057 aa16.05■□□□□ 0.16
ATL3-202ENST00000535789 MGAT4DA6NG13 374 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 ERI2A8K979 691 aaKnown RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 A8MU76 341 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 PSMD3O43242 534 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 EFSO43281 561 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 TYRP1P17643 537 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 CAPZBP47756 277 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 LEPRP48357 1165 aaKnown RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 CXADRP78310 365 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 ACVR1Q04771 509 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 SEMA3AQ14563 771 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 WHAMMP3Q1A5X7 153 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 LONRF2Q1L5Z9 754 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 SOWAHCQ53LP3 525 aaPredicted RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 ZRANB3Q5FWF4 1079 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 PCSK4Q6UW60 755 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 OR2L2Q8NH16 312 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 SH3KBP1Q96B97 665 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 ULK4Q96C45 1275 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 AHCYL2Q96HN2 611 aaKnown RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 INSM2Q96T92 566 aaPredicted RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 NRTNQ99748 197 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 ZMYND15Q9H091 742 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 WWP1Q9H0M0 922 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 SIDT1Q9NXL6 827 aaKnown RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 ZDHHC3Q9NYG2 299 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 PAK5Q9P286 719 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 KLHL3Q9UH77 587 aa16.04■□□□□ 0.16
ATL3-202ENST00000535789 DRG1Q9Y295 367 aaKnown RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 DNMT3AQ9Y6K1 912 aaPredicted RBP16.04■□□□□ 0.16
ATL3-202ENST00000535789 TCRBV7S3A2A0A539 114 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 CCDC162PA2VCL2 907 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 EFCAB7A8K855 629 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 ZW10O43264 779 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 KCNJ13O60928 360 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 UBXN7O94888 489 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 APRTP07741 180 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 MTHFD1P11586 935 aaKnown RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 ATP1B2P14415 290 aaPredicted RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 VCLP18206 1134 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 GPR33Q49SQ1 333 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 ZNF572Q7Z3I7 529 aaPredicted RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 LINC00523Q86TU6 105 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 TRIM48Q8IWZ4 208 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 CLDN19Q8N6F1 224 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 CCDC89Q8N998 374 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 AVL9Q8NBF6 648 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 243.1 ms