RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GMFBP60983 142 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 LDLRAP1Q5SW96 308 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 TSTD2Q5T7W7 516 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GPR65Q8IYL9 337 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 IKZF4Q9H2S9 585 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GPN1Q9HCN4 374 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 ZNF879B4DU55 563 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GPR25O00155 361 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 WFS1O76024 890 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 RPP38P78345 283 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 IL18R1Q13478 541 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GSTCDQ8NEC7 633 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 RIT1Q92963 219 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 CHMP1AQ9HD42 196 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GRIN2DO15399 1336 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 LOC110117498-PIK3R3F6TDL0 507 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 CCL22O00626 93 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 NADKO95544 446 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 CCKBRP32239 447 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 TAS2R50P59544 299 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 HEPACAMQ14CZ8 416 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 STX12Q86Y82 276 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 CHST4Q8NCG5 386 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 RPL10LQ96L21 214 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 TRIM2Q9C040 744 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 C8orf4Q9NR00 106 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 A0A0X1KG70 313 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 NELFEP18615 380 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 GNALP38405 381 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 LILRA4P59901 499 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 CLEC6AQ6EIG7 209 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 OR2T34Q8NGX1 318 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 OR2T3Q8NH03 318 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 C12orf66Q96MD2 445 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 EBPLQ9BY08 206 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 ACSS2Q9NR19 701 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 FKBPLQ9UIM3 349 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
SFSWAP-203ENST00000535236 KIAA1210Q9ULL0 1709 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 WRBO00258 174 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 BCKDKO14874 412 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 AHCYL1O43865 530 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 MSX2P35548 267 aaPredicted RBP17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 PRMT2P55345 433 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 SIM2Q14190 667 aaPredicted RBP17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 PUS10Q3MIT2 529 aaKnown RBP17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 ZNF567Q8N184 647 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 SIDT2Q8NBJ9 832 aaKnown RBP17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 KAT2AQ92830 837 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 ART5Q96L15 291 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 KCND1Q9NSA2 647 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 FADS3Q9Y5Q0 445 aa17.96■□□□□ 0.46
SFSWAP-203ENST00000535236 PLK4O00444 970 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PLIN3O60664 434 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 DBIP07108 87 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 CPN2P22792 545 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 DDX6P26196 483 aaKnown RBP eCLIP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 IL18Q14116 193 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 BICRALQ6AI39 1079 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 LIX1Q8N485 282 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 DHX33Q9H6R0 707 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 MCCC2Q9HCC0 563 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 R3HDM2Q9Y2K5 976 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 TM7SF2O76062 418 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 CYB5AP00167 134 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 ALDH4A1P30038 563 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 CTSOP43234 321 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 XIAPP98170 497 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 FAM47BQ8NA70 645 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 OR52J3Q8NH60 311 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 HCAR2Q8TDS4 363 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 HIST1H2AAQ96QV6 131 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 CDKN2BP42772 138 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 DCBLD1Q8N8Z6 715 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 TRPV1Q8NER1 839 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 OR2L5Q8NG80 312 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 BRSK1Q8TDC3 778 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 FAR1Q8WVX9 515 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 TP53INP1Q96A56 240 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 IFT80Q9P2H3 777 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 RPL26L1Q9UNX3 145 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 LIMK2P53671 638 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PPP3R1P63098 170 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 ABATP80404 500 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PPM1JQ5JR12 505 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 NUP54Q7Z3B4 507 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PYROXD2Q8N2H3 581 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PQLC1Q8N2U9 271 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 PSMG2Q969U7 264 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 ABCB8Q9NUT2 735 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 NKIRAS2Q9NYR9 191 aa17.95■□□□□ 0.46
SFSWAP-203ENST00000535236 COL6A1P12109 1028 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 CCR10P46092 362 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 PGDP52209 483 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 EVX2Q03828 476 aa17.94■□□□□ 0.46
SFSWAP-203ENST00000535236 FBXO48Q5FWF7 155 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms