RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CKMT1AP12532 417 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 CEACAM1P13688 526 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 CKMT2P17540 419 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 VCLP18206 1134 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 IDSP22304 550 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 CCR7P32248 378 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 DAB2P98082 770 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 MGAT5Q09328 741 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 NR0B2Q15466 257 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 C14orf28Q4W4Y0 310 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 METRNLQ641Q3 311 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 GUSBP11Q6P575 273 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 ZNF549Q6P9A3 640 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 ABRAXAS1Q6UWZ7 409 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 C3orf62Q6ZUJ4 267 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 SLCO6A1Q86UG4 719 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 RELL1Q8IUW5 271 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 ARL14Q8N4G2 192 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 HM13Q8TCT9 377 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 CALML6Q8TD86 181 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 COG4Q9H9E3 785 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 PPANQ9NQ55 473 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 INTS10Q9NVR2 710 aaKnown RBP12.88□□□□□ -0.35
TMEM258-202ENST00000535042 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 PADI4Q9UM07 663 aa12.88□□□□□ -0.35
TMEM258-202ENST00000535042 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PDZK1P1A8MUH7 402 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 CXorf49A8MYA2 514 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 QSOX1O00391 747 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 NIPSNAP2O75323 286 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 TRIM16O95361 564 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 AHSGP02765 367 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 FTH1P02794 183 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 GSTA2P09210 222 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 FAM153BP0C7A2 387 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 MYBL2P10244 700 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 F3P13726 295 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PDHA2P29803 388 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ABCG1P45844 678 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ID4P47928 161 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PREPP48147 710 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ACADVLP49748 655 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 SIM1P81133 766 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 BRD3Q15059 726 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 KYNUQ16719 465 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 FAM153CQ494X1 144 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PERM1Q5SV97 790 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 AGAP9Q5VTM2 703 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 LRRC6Q86X45 466 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 SLC37A2Q8TED4 501 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ELMO1Q92556 727 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 WASH6PQ9NQA3 447 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 ZNF624Q9P2J8 865 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 GALPQ9UBC7 116 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 GNPTGQ9UJJ9 305 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PSMD13Q9UNM6 376 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 MED16Q9Y2X0 877 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PCDHB1Q9Y5F3 818 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 PSAT1Q9Y617 370 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 RNF215Q9Y6U7 377 aa12.87□□□□□ -0.35
TMEM258-202ENST00000535042 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-202ENST00000535042 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-202ENST00000535042 SLC5A10A0PJK1 596 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 KLHL33A6NCF5 533 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 OR52A4PA6NMU1 304 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 PFDN6O15212 129 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 PPM1DO15297 605 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 ESR1P03372 595 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 ACP1P24666 158 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 SLC19A1P41440 591 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 RPIAP49247 311 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 CYS1Q717R9 158 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 EFL1Q7Z2Z2 1120 aaKnown RBP12.86□□□□□ -0.35
TMEM258-202ENST00000535042 FBF1Q8TES7 1133 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 GLMNQ92990 594 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 RMDN2Q96LZ7 410 aa12.86□□□□□ -0.35
TMEM258-202ENST00000535042 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms