RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ARL4AP40617 200 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ALDH3B2P48448 385 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 OR2B6P58173 313 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CAMK1Q14012 370 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PTPRCAPQ14761 206 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 OXA1LQ15070 435 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CLVS2Q5SYC1 327 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SLC39A11Q8N1S5 342 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SCML4Q8N228 414 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MYLIPQ8WY64 445 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MFSD3Q96ES6 412 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 HMCESQ96FZ2 354 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 TOX2Q96NM4 488 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 DHRS9Q9BPW9 319 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 HOXD1Q9GZZ0 328 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 EFCAB1Q9HAE3 211 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 QPCTLQ9NXS2 382 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SLC2A6Q9UGQ3 507 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 H0YJX3 145 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 H3BNC9 293 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 LILRB3O75022 631 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PSKH1P11801 424 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PIK3R1P27986 724 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CCR2P41597 374 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MAPK12P53778 367 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PRMT2P55345 433 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ABCE1P61221 599 aaKnown RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SLC10A7Q0GE19 358 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 TP53I13Q8NBR0 393 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RNF34Q969K3 372 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 FBXO32Q969P5 355 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 VOPP1Q96AW1 172 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SH3YL1Q96HL8 342 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 C20orf27Q9GZN8 174 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CHRAC1Q9NRG0 131 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 HCFC1R1Q9NWW0 138 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 UBA2Q9UBT2 640 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 BTBD3Q9Y2F9 522 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 KLHL20Q9Y2M5 609 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ANTXRLA6NF34 631 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 hCG_2039718K7EN88 272 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 GNGT2O14610 69 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ABLIM3O94929 683 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RPLP2P05387 115 aaKnown RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MATN1P21941 496 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CPOXP36551 454 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RGRP47804 291 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ARHGDIAP52565 204 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MLLT6P55198 1093 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ERVFC1P60507 584 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RPS24P62847 133 aaKnown RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 AGAP7PQ5VUJ5 663 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 TMEM198Q66K66 360 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 EFL1Q7Z2Z2 1120 aaKnown RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MFSD6LQ8IWD5 586 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 OR8H1Q8NGG4 311 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 LPGAT1Q92604 370 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 SNAPC3Q92966 411 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PSMG2Q969U7 264 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 NXNL1Q96CM4 212 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 YME1L1Q96TA2 773 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 CDADC1Q9BWV3 514 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 NPLQ9BXD5 320 aaPredicted RBP8.93□□□□□ -0.98
SF3B2-216ENST00000534765 MROQ9BYG7 248 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 ACSS3Q9H6R3 686 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 RMND5AQ9H871 391 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 NTN4Q9HB63 628 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 OLAHQ9NV23 265 aa8.93□□□□□ -0.98
SF3B2-216ENST00000534765 PCM1Q15154 2024 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 SYNCRIPO60506 623 aaKnown RBP8.92□□□□□ -0.98
SF3B2-216ENST00000534765 GSRP00390 522 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 TIMP1P01033 207 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 ERVK-10P10266 1014 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 PCNAP12004 261 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 DBPQ10586 325 aaPredicted RBP8.92□□□□□ -0.98
SF3B2-216ENST00000534765 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 MCFD2Q8NI22 146 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 BADQ92934 168 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 SGF29Q96ES7 293 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 NARFLQ9H6Q4 476 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 RIC8BQ9NVN3 520 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 ZNF358Q9NW07 568 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 PAK5Q9P286 719 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 FAM8A1Q9UBU6 413 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 C16orf96A6NNT2 1141 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 B8ZZF3 427 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 RALBP11234 206 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 AZGP1P25311 298 aaKnown RBP8.92□□□□□ -0.98
SF3B2-216ENST00000534765 YWHAQP27348 245 aa8.92□□□□□ -0.98
SF3B2-216ENST00000534765 ELK4P28324 431 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms