RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	KCNC3	Q14003	757 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	VEPH1	Q14D04	833 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	HFE	Q30201	348 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ANKDD1A	Q495B1	522 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM270	Q6UE05	265 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TAOK1	Q7L7X3	1001 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CTU1	Q7Z7A3	348 aa	Known RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CEP57	Q86XR8	500 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CNTN4	Q8IWV2	1026 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	DHX40	Q8IX18	779 aa	Known RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	RNF168	Q8IYW5	571 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	OTUD6B	Q8N6M0	293 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	IPMK	Q8NFU5	416 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TSPAN14	Q8NG11	270 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	GDPD5	Q8WTR4	605 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	BICD1	Q96G01	975 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CTAGE1	Q96RT6	745 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	WDR77	Q9BQA1	342 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	UTP14A	Q9BVJ6	771 aa	Known RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	SLCO5A1	Q9H2Y9	848 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	DNAJC18	Q9H819	358 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979		Q9N2J8	555 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	PAG1	Q9NWQ8	432 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ARL15	Q9NXU5	204 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	NINJ2	Q9NZG7	142 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ACTR3B	Q9P1U1	418 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	DUSP12	Q9UNI6	340 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	DHDH	Q9UQ10	334 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	PIN4	Q9Y237	131 aa	Known RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	IKBKG	Q9Y6K9	419 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM94	Q12767	1356 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	RICTOR	Q6R327	1708 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CLIP1	P30622	1438 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TRO	Q12816	1431 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	LRRC9	Q6ZRR7	1453 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ZMYM4	Q5VZL5	1548 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	RNF103-CHMP3	A0A140T963	221 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CLEC18A	A5D8T8	446 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	RGSL1	A5PLK6	1076 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	BECN2	A8MW95	431 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	PRSS44	E7EML9	344 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	PRR23D1	E9PI22	279 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	RNF103	O00237	685 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	IFIT3	O14879	490 aa	Known RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	SEC14L5	O43304	696 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TRUB2	O95900	331 aa	Known RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	BCL10	O95999	233 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	GBA	P04062	536 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ACTN1	P12814	892 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	PDGFRA	P16234	1089 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ACHE	P22303	614 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	KLRC2	P26717	231 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TKTL1	P51854	596 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	STX1B	P61266	288 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ASIC1	P78348	528 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ECT2L	Q008S8	904 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	EGR4	Q05215	589 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ZBTB16	Q05516	673 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979		Q0VFX4	171 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	DRAP1	Q14919	205 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	RRS1	Q15050	365 aa	Known RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	SHB	Q15464	509 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	NAB2	Q15742	525 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	DCAF12L2	Q5VW00	463 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TRIL	Q7L0X0	811 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TDRP	Q86YL5	185 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	WDR63	Q8IWG1	891 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TBC1D21	Q8IYX1	336 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	SFRP1	Q8N474	314 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	AFAP1	Q8N556	730 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CLEC18C	Q8NCF0	446 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ENGASE	Q8NFI3	743 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	OR10S1	Q8NGN2	331 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CFAP61	Q8NHU2	1237 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	GRAPL	Q8TC17	118 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	SPATA18	Q8TC71	538 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	BICD2	Q8TD16	824 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	NUDCD2	Q8WVJ2	157 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF606	Q8WXB4	792 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	MIB2	Q96AX9	1013 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF333	Q96JL9	665 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM68	Q96MH6	324 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CDRT15	Q96T59	188 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CACNG6	Q9BXT2	260 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TRIM7	Q9C029	511 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	B3GNT4	Q9C0J1	378 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	GOLPH3L	Q9H4A5	285 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TAS2R3	Q9NYW6	316 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	FETUB	Q9UGM5	382 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CPSF3	Q9UKF6	684 aa	Known RBP	4.62	□□□□□ -1.67
ATM-223	ENST00000533979	ICK	Q9UPZ9	632 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	TRIM17	Q9Y577	477 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CNTNAP2	Q9UHC6	1331 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	A2ML1	A8K2U0	1454 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	CCDC18	Q5T9S5	1454 aa		4.62	□□□□□ -1.67
ATM-223	ENST00000533979	FYCO1	Q9BQS8	1478 aa		4.62	□□□□□ -1.67

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