RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TRMT6Q9UJA5 497 aaKnown RBP16.4■□□□□ 0.22
CTSB-228ENST00000533455 NAALAD2Q9Y3Q0 740 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 MAGED1Q9Y5V3 778 aaPredicted RBP16.4■□□□□ 0.22
CTSB-228ENST00000533455 G3V2T6 193 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 TBC1D4O60343 1298 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 KATNA1O75449 491 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 IGLV3-27P01718 113 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 HTR1AP08908 422 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 JAK1P23458 1154 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 OR1E1P30953 314 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 GNA12Q03113 381 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 BFSP2Q13515 415 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 KIAA0040Q15053 153 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 SDHAF4Q5VUM1 108 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 LETMD1Q6P1Q0 360 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 GALNT13Q8IUC8 556 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 OR4K2Q8NGD2 314 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 OR52E4Q8NGH9 312 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 CD200R1Q8TD46 325 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTSB-228ENST00000533455 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 CD274Q9NZQ7 290 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 SELENONQ9NZV5 590 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 PDE10AQ9Y233 779 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 PCDHGA8Q9Y5G5 932 aa16.4■□□□□ 0.22
CTSB-228ENST00000533455 F8W810 466 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 GMNNO75496 209 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 G6PDP11413 515 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 NFKBIAP25963 317 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 GPR15P49685 360 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 HTR6P50406 440 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 DSC3Q14574 896 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 CTSL3PQ5NE16 218 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 SLC16A12Q6ZSM3 486 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 IGFN1Q86VF2 1251 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 CHCHD4Q8N4Q1 142 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 SIDT2Q8NBJ9 832 aaKnown RBP16.39■□□□□ 0.21
CTSB-228ENST00000533455 ZNF555Q8NEP9 628 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 OR52B6Q8NGF0 335 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 ZNF347Q96SE7 839 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 NEURL2Q9BR09 285 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 AMBRA1Q9C0C7 1298 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 OLA1Q9NTK5 396 aaKnown RBP16.39■□□□□ 0.21
CTSB-228ENST00000533455 ENPP5Q9UJA9 477 aa16.39■□□□□ 0.21
CTSB-228ENST00000533455 A0A0U1RQF3 1178 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 LSM1O15116 133 aaKnown RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 PCNAP12004 261 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 ITIH1P19827 911 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 IL2P60568 153 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 AQP6Q13520 282 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 DDR2Q16832 855 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 GDF6Q6KF10 455 aaPredicted RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 GLT6D1Q7Z4J2 308 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 PARP8Q8N3A8 854 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 TTC30BQ8N4P2 665 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 ZNF548Q8NEK5 533 aaPredicted RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 MDGA1Q8NFP4 955 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 ABHD11Q8NFV4 315 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 SGCDQ92629 289 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 ESAMQ96AP7 390 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 RBM4BQ9BQ04 359 aaKnown RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 RBM4Q9BWF3 364 aaKnown RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 FUNDC2Q9BWH2 189 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 DOLKQ9UPQ8 538 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 C1orf232A0A0U1RR37 186 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 NIPSNAP2O75323 286 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 KCNH1O95259 989 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 CDH3P22223 829 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 HOXD9P28356 352 aaPredicted RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 CLCN4P51793 760 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 PCBP2Q15366 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTSB-228ENST00000533455 NKG7Q16617 165 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 CTU2Q2VPK5 515 aaKnown RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 EGFLAMQ63HQ2 1017 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 LINC00299Q6ZSB3 139 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 FAM86B1Q8N7N1 296 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 OR2T12Q8NG77 320 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 EEF1AKMT1Q8WVE0 214 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 BCL7BQ9BQE9 202 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 SMURF2Q9HAU4 748 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTSB-228ENST00000533455 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
CTSB-228ENST00000533455 POLR3HQ9Y535 204 aaPredicted RBP16.38■□□□□ 0.21
CTSB-228ENST00000533455 PFDN6O15212 129 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 COQ9O75208 318 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 BCAS1O75363 584 aaPredicted RBP16.37■□□□□ 0.21
CTSB-228ENST00000533455 CAPN1P07384 714 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 CD52P31358 61 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 TTPAP49638 278 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 CDKN1CP49918 316 aaPredicted RBP16.37■□□□□ 0.21
CTSB-228ENST00000533455 DGKQP52824 942 aa16.37■□□□□ 0.21
CTSB-228ENST00000533455 CD47Q08722 323 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms