RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 TBC1D15Q8TC07 691 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 LRRC20Q8TCA0 184 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 ST7LQ8TDW4 575 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 PPP4R1Q8TF05 950 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 ARHGEF26Q96DR7 871 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 NEIL1Q96FI4 390 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 DNAJC1Q96KC8 554 aaKnown RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 RPL10LQ96L21 214 aaKnown RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 GNRHR2Q96P88 292 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 CSPG4P5Q96PW8 444 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 CAMKK2Q96RR4 588 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 STRBPQ96SI9 672 aaKnown RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 BTBD10Q9BSF8 475 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 NPLQ9BXD5 320 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 ACE2Q9BYF1 805 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 KCNH6Q9H252 994 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 HSD3B7Q9H2F3 369 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 FOXP1Q9H334 677 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 OR51M1Q9H341 326 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 PIGUQ9H490 435 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 METTL8Q9H825 291 aaKnown RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 LIN28AQ9H9Z2 209 aaKnown RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 MYOZ1Q9NP98 299 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 SLC35C2Q9NQQ7 365 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 PCDHB16Q9NRJ7 776 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 OLFML3Q9NRN5 406 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 CNNM1Q9NRU3 951 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 GKN1Q9NS71 199 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 GIMAP4Q9NUV9 329 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 COA4Q9NYJ1 87 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 SH3BP4Q9P0V3 963 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 ACTR3BQ9P1U1 418 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.45□□□□□ -1.54
CD44-236ENST00000533222 SLC24A2Q9UI40 661 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 POU2F3Q9UKI9 436 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 GJD2Q9UKL4 321 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 CAPN11Q9UMQ6 739 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 NFU1Q9UMS0 254 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 SNX12Q9UMY4 172 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 PCDHGB4Q9UN71 923 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 DLGAP4Q9Y2H0 992 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 NDUFAF1Q9Y375 327 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 ZMYM6O95789 1325 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 NESP48681 1621 aa5.45□□□□□ -1.54
CD44-236ENST00000533222 A0A1B0GVM2 712 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 A0A1W2PQ72 361 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 SLC15A5A6NIM6 579 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 A8MUI8 341 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 FPGTO14772 594 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PPEF2O14830 753 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 ANGPT2O15123 496 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 LAMTOR5O43504 91 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 GPRIN2O60269 458 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PRAMEF4O60810 478 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 MFAP3LO75121 409 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 SNAPC5O75971 98 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PDE9AO76083 593 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 TOX4O94842 621 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 AHSA1O95433 338 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 IL33O95760 270 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 SCGB1D2O95969 90 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 IFNGP01579 166 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 TNNC2P02585 160 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 UBTFL1P0CB47 393 aaPredicted RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 NR2F1P10589 423 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 THRAP10827 490 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 ACADMP11310 421 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 FDPSP14324 419 aaKnown RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 PHKG2P15735 406 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 UGT1A4P22310 534 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 MAPK3P27361 379 aaPredicted RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 PCSK6P29122 969 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 OXTRP30559 389 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 GDI1P31150 447 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 RCVRNP35243 200 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 UGT1A5P35504 534 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 HMGCLP35914 325 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 DDOSTP39656 456 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 KIR3DL2P43630 455 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 KCNJ5P48544 419 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 HNMTP50135 292 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 GATMP50440 423 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 TPMTP51580 245 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 P2RY4P51582 365 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PPP2CBP62714 309 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 SKP1P63208 163 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PPP2CAP67775 309 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 MAT1AQ00266 395 aaKnown RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 MYBPC1Q00872 1141 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 CREMQ03060 361 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 DLG2Q15700 870 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 TBCCQ15814 346 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 KCTD21Q4G0X4 260 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 KHDC1Q4VXA5 237 aaKnown RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 MDH1BQ5I0G3 518 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 PPM1LQ5SGD2 360 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 MARCH8Q5T0T0 291 aa5.44□□□□□ -1.54
CD44-236ENST00000533222 RARS2Q5T160 578 aaKnown RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 MBNL2Q5VZF2 373 aaKnown RBP5.44□□□□□ -1.54
CD44-236ENST00000533222 AFMIDQ63HM1 303 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms