RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CCDC68Q9H2F9 335 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 ALG9Q9H6U8 611 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 HEY2Q9UBP5 337 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 SLC12A4Q9UP95 1085 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PRSS21Q9Y6M0 314 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PRMT5O14744 637 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 ZBTB14O43829 449 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 NIPSNAP2O75323 286 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 TFEBP19484 476 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 AKT1P31749 480 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 KCNC1P48547 511 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 KPNA2P52292 529 aaKnown RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 NAGLUP54802 743 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PDAP1Q13442 181 aaKnown RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 INPP5AQ14642 412 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 KLC3Q6P597 504 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PIWIL2Q8TC59 973 aaKnown RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PPP4R1Q8TF05 950 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PTERQ96BW5 349 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 P2RY12Q9H244 342 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 MBD1Q9UIS9 605 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 PIKFYVEQ9Y2I7 2098 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 H3BMM5 538 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 AXIN1O15169 862 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 DCTN3O75935 186 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 HSPA4LO95757 839 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 CHRNGP07510 517 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 SERPINB3P29508 390 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 SETDB1Q15047 1291 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 ACAP2Q15057 778 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 PAQR3Q6TCH7 311 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 ISCA2Q86U28 154 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF781Q8N8C0 355 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 DDHD1Q8NEL9 900 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 AGR3Q8TD06 166 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 SREK1Q8WXA9 508 aaKnown RBP18.21■□□□□ 0.51
SMPD1-208ENST00000533123 PRR11Q96HE9 360 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-208ENST00000533123 GPR21Q99679 349 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 SLC30A3Q99726 388 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 CLPBQ9H078 707 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 ACTR5Q9H9F9 607 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-208ENST00000533123 EBF2Q9HAK2 575 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 CYP4F12Q9HCS2 524 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 SLC40A1Q9NP59 571 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 ABCA7Q8IZY2 2146 aa18.21■□□□□ 0.51
SMPD1-208ENST00000533123 IQCF5A8MTL0 148 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 CHUKO15111 745 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 PKMP14618 531 aaKnown RBP18.21■□□□□ 0.5
SMPD1-208ENST00000533123 CD1DP15813 335 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 NSG1P42857 185 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 DET1Q7L5Y6 550 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 MAVSQ7Z434 540 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 ALYREFQ86V81 257 aaKnown RBP18.21■□□□□ 0.5
SMPD1-208ENST00000533123 HEATR4Q86WZ0 1026 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 PHYKPLQ8IUZ5 450 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM105Q8N8V8 129 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 BIRC7Q96CA5 298 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 EBF4Q9BQW3 602 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 LGR4Q9BXB1 951 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 C1QTNF7Q9BXJ2 289 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 POPDC3Q9HBV1 291 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 KCNK4Q9NYG8 393 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 TAS2R13Q9NYV9 303 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 OR1A2Q9Y585 309 aa18.21■□□□□ 0.5
SMPD1-208ENST00000533123 SDK1Q7Z5N4 2213 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 IGLV3-16A0A075B6K0 115 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM114B3SHH9 223 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 LATO43561 262 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 IGHV4-34P06331 123 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 SLC26A3P40879 764 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 ADARP55265 1226 aaKnown RBP18.2■□□□□ 0.5
SMPD1-208ENST00000533123 ILF2Q12905 390 aaKnown RBP18.2■□□□□ 0.5
SMPD1-208ENST00000533123 BNIP1Q12981 228 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 LDLRAP1Q5SW96 308 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 DEFB119Q8N690 84 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 SIDT2Q8NBJ9 832 aaKnown RBP18.2■□□□□ 0.5
SMPD1-208ENST00000533123 FUBP1Q96AE4 644 aaKnown RBP18.2■□□□□ 0.5
SMPD1-208ENST00000533123 DNAH14Q0VDD8 3507 aa18.2■□□□□ 0.5
SMPD1-208ENST00000533123 C10orf142B7Z368 130 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 H2AFYO75367 372 aaKnown RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ESR1P03372 595 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 MSH3P20585 1137 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ATP5F1P24539 256 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 IGFALSP35858 605 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 KIAA0895LQ68EN5 471 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 CCNYL1Q8N7R7 359 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 GBP7Q8N8V2 638 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 GIMAP7Q8NHV1 300 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ASB12Q8WXK4 309 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 SKA1Q96BD8 255 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 DCUN1D1Q96GG9 259 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 SHCBP1LQ9BZQ2 653 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 ZFP69BQ9UJL9 534 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 IKZF3Q9UKT9 509 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 CA5BQ9Y2D0 317 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 OAS3Q9Y6K5 1087 aaKnown RBP18.19■□□□□ 0.5
SMPD1-208ENST00000533123 NDUFS2O75306 463 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 RBP1P09455 135 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 MPSTP25325 297 aa18.19■□□□□ 0.5
SMPD1-208ENST00000533123 CLDN2P57739 230 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms