RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TLE1Q04724 770 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 DMPKQ09013 629 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 SEPT6Q14141 434 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 ERV3-1Q14264 604 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 PRPSAP1Q14558 356 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 BEND7Q8N7W2 519 aaPredicted RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 SIDT2Q8NBJ9 832 aaKnown RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 OR4K2Q8NGD2 314 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 C9orf43Q8TAL5 461 aaPredicted RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 NAT14Q8WUY8 206 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 KLHL6Q8WZ60 621 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 ZNF514Q96K75 400 aaPredicted RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 GBA3Q9H227 469 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 ASB8Q9H765 288 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 PDE7BQ9NP56 450 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 COL12A1Q99715 3063 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 IGHV5-51A0A0C4DH38 117 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 GAPDHSO14556 408 aaPredicted RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 STK10O94804 968 aaKnown RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 FGF5P12034 268 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 NELFEP18615 380 aaKnown RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 F8A1P23610 371 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 COPS2P61201 443 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 TUBB3Q13509 450 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 GSE1Q14687 1217 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 TAF1AQ15573 450 aaPredicted RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 SKIDA1Q1XH10 827 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 ACTL9Q8TC94 416 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 C12orf66Q96MD2 445 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 FAM118BQ9BPY3 351 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 RAB33BQ9H082 229 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 WWP1Q9H0M0 922 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 EPHA6Q9UF33 1036 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 FKBPLQ9UIM3 349 aa17.43■□□□□ 0.38
PCF11-206ENST00000533018 AAR2Q9Y312 384 aaKnown RBP17.43■□□□□ 0.38
PCF11-206ENST00000533018 UBA6A0AVT1 1052 aaPredicted RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 C5orf60A6NFR6 353 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 KCNN4O15554 427 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 SRP72O76094 671 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 IPO7O95373 1038 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 MTHFD1P11586 935 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 PSMB4P28070 264 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 EIF3EP60228 445 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 KRT33BQ14525 404 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 KCNAB1Q14722 419 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCF11-206ENST00000533018 DNTTIP2Q5QJE6 756 aaKnown RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 METRNLQ641Q3 311 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 ARMC6Q6NXE6 501 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 SARM1Q6SZW1 724 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 CDKL3Q8IVW4 592 aaPredicted RBP17.42■□□□□ 0.38
PCF11-206ENST00000533018 UBXN4Q92575 508 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 DCUN1D1Q96GG9 259 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 ABHD17AQ96GS6 310 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 MAP3K3Q99759 626 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 SMOXQ9NWM0 555 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 HRASLS2Q9NWW9 162 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 CRLS1Q9UJA2 301 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 KCND3Q9UK17 655 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 RARRES3Q9UL19 164 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 PADI1Q9ULC6 663 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 KCTD3Q9Y597 815 aa17.42■□□□□ 0.38
PCF11-206ENST00000533018 FLNCQ14315 2725 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 MGAT4DA6NG13 374 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 MT-ND3P03897 115 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 SLC35G4P0C7Q5 338 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 RBP3P10745 1247 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 RALBP11234 206 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 FOLR1P15328 257 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 CTNNA1P35221 906 aaKnown RBP17.41■□□□□ 0.38
PCF11-206ENST00000533018 CETN2P41208 172 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 TMPRSS15P98073 1019 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 OLIG2Q13516 323 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 ANKRD20A2Q5SQ80 823 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 ANKRD20A1Q5TYW2 823 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 ANKRD20A3Q5VUR7 823 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 DUS1LQ6P1R4 473 aaKnown RBP17.41■□□□□ 0.38
PCF11-206ENST00000533018 OR2L2Q8NH16 312 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 LRRC45Q96CN5 670 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 INSM2Q96T92 566 aaPredicted RBP17.41■□□□□ 0.38
PCF11-206ENST00000533018 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 ACSL5Q9ULC5 683 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 PCDHA3Q9Y5H8 950 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 NBASA2RRP1 2371 aa17.41■□□□□ 0.38
PCF11-206ENST00000533018 PIPSLA2A3N6 862 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CDC14CA4D256 554 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 OR6C74A6NCV1 312 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 SOWAHDA6NJG2 315 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 TIAF1O95411 115 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CRTAMO95727 393 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 POLBP06746 335 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 EBLN1P0CF75 366 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 RWDD2BP57060 319 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 PDE1BQ01064 536 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 ACY1Q03154 408 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CRTC2Q53ET0 693 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms