RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 KCTD11Q693B1 232 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 AMZ2Q86W34 360 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 PLXDC1Q8IUK5 500 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 TRIM48Q8IWZ4 208 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 RASGEF1CQ8N431 466 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 MED8Q96G25 268 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 TENM4Q6N022 2769 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 C5orf60A6NFR6 353 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 AGAP14A8MT82 685 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 CCL22O00626 93 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 CAPN5O15484 640 aaPredicted RBP18.56■□□□□ 0.56
SSH3-209ENST00000532600 RAD1O60671 282 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 SRP72O76094 671 aaKnown RBP18.56■□□□□ 0.56
SSH3-209ENST00000532600 METTL18O95568 372 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 CAPZBP47756 277 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 GDF10P55107 478 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 RPE65Q16518 533 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 PAPD7Q5XG87 772 aaKnown RBP18.56■□□□□ 0.56
SSH3-209ENST00000532600 DET1Q7L5Y6 550 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 C1orf54Q8WWF1 131 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 RNF31Q96EP0 1072 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 PBKQ96KB5 322 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 TTC25Q96NG3 672 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 TGM7Q96PF1 710 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 TBL1YQ9BQ87 522 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 ARNT2Q9HBZ2 717 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 PSMD13Q9UNM6 376 aa18.56■□□□□ 0.56
SSH3-209ENST00000532600 AAR2Q9Y312 384 aaKnown RBP18.56■□□□□ 0.56
SSH3-209ENST00000532600 C2orf81A6NN90 581 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 LDB2O43679 373 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 LIASO43766 372 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 KCNJ13O60928 360 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 ITGB2P05107 769 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 MSNP26038 577 aaKnown RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 PBLDP30039 288 aaPredicted RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 SH3BP2P78314 561 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 TBR1Q16650 682 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 FNBP1LQ5T0N5 605 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 CACNA2D3Q8IZS8 1091 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 FAM71DQ8N9W8 422 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 TTC13Q8NBP0 860 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 CXorf40BQ96DE9 158 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 TEFMQ96QE5 360 aaKnown RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 NAPGQ99747 312 aaPredicted RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 ZCCHC2Q9C0B9 1178 aaKnown RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 ASB8Q9H765 288 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 DNMT3AQ9Y6K1 912 aaPredicted RBP18.55■□□□□ 0.56
SSH3-209ENST00000532600 BOD1L1Q8NFC6 3051 aa18.55■□□□□ 0.56
SSH3-209ENST00000532600 DLGAP3O95886 979 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 AMD1P17707 334 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 VCLP18206 1134 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 MSH3P20585 1137 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 CDKN1CP49918 316 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 ATP1A2P50993 1020 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 TMPRSS15P98073 1019 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 PRPSAP1Q14558 356 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 OASLQ15646 514 aaKnown RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 LONRF2Q1L5Z9 754 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 METRNLQ641Q3 311 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 DUS1LQ6P1R4 473 aaKnown RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 CEACAM20Q6UY09 585 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 RBM12BQ8IXT5 1001 aaKnown RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 LILRA3Q8N6C8 439 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 PRELID2Q8N945 189 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 SPDYE1Q8NFV5 336 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 INSM2Q96T92 566 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 ZNF768Q9H5H4 540 aaKnown RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 FAM96AQ9H5X1 160 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 EPHA6Q9UF33 1036 aa18.54■□□□□ 0.56
SSH3-209ENST00000532600 TTC7AQ9ULT0 858 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 TMEM184BQ9Y519 407 aaPredicted RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 CFAP20Q9Y6A4 193 aaKnown RBP18.54■□□□□ 0.56
SSH3-209ENST00000532600 TLN1Q9Y490 2541 aaKnown RBP18.53■□□□□ 0.56
SSH3-209ENST00000532600 LOC101059948A0A1B0GTJ6 334 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 MGAT4DA6NG13 374 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 STK17BO94768 372 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 STK10O94804 968 aaKnown RBP18.53■□□□□ 0.56
SSH3-209ENST00000532600 FAM87AP0C7U9 286 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 PRSS56P0CW18 603 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 ZNF28P17035 718 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 ITGB6P18564 788 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 AKT1P31749 480 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 SEPHS1P49903 392 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 ETF1P62495 437 aaKnown RBP18.53■□□□□ 0.56
SSH3-209ENST00000532600 KCTD19Q17RG1 926 aaPredicted RBP18.53■□□□□ 0.56
SSH3-209ENST00000532600 BCL7AQ4VC05 210 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 FAM92BQ6ZTR7 304 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 PRSS42Q7Z5A4 293 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 UNC5BQ8IZJ1 945 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 IL22RA1Q8N6P7 574 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 TRIM44Q96DX7 344 aaPredicted RBP18.53■□□□□ 0.56
SSH3-209ENST00000532600 FERMT1Q9BQL6 677 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 WWP1Q9H0M0 922 aa18.53■□□□□ 0.56
SSH3-209ENST00000532600 CTAGE9A4FU28 777 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 CES2O00748 559 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 POLR1CO15160 346 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 TOX3O15405 576 aaPredicted RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 MTHFD1P11586 935 aaKnown RBP18.52■□□□□ 0.56
SSH3-209ENST00000532600 TPH1P17752 444 aa18.52■□□□□ 0.56
SSH3-209ENST00000532600 HALP42357 657 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms