RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LILRA3Q8N6C8 439 aaPredicted RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 OR2L2Q8NH16 312 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CCL4L1Q8NHW4 92 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 TSPAN17Q96FV3 270 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 LINC00615Q96LM1 132 aaPredicted RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 SLC30A3Q99726 388 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 TMEM109Q9BVC6 243 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 NUSAP1Q9BXS6 441 aaKnown RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 ZNF446Q9NWS9 450 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 DNMT3AQ9Y6K1 912 aaPredicted RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 MGAT4DA6NG13 374 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 GOLGA6L10A6NI86 522 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 H3BM21 787 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 TPP1O14773 563 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 RGS16O15492 202 aaPredicted RBP17.34■□□□□ 0.37
CTSB-222ENST00000531551 NME1P15531 152 aaKnown RBP17.34■□□□□ 0.37
CTSB-222ENST00000531551 AK4P27144 223 aaPredicted RBP17.34■□□□□ 0.37
CTSB-222ENST00000531551 SERPINB8P50452 374 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 CLCN7P51798 805 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 TIAL1Q01085 375 aaKnown RBP eCLIP17.34■□□□□ 0.373e-20■□□□□ 9.6
CTSB-222ENST00000531551 CTBSQ01459 385 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 SEPT7Q16181 437 aaKnown RBP17.34■□□□□ 0.37
CTSB-222ENST00000531551 TCEAL6Q6IPX3 200 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 SLC23A3Q6PIS1 610 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 ZBTB2Q8N680 514 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 TCEAL3Q969E4 200 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 MTBPQ96DY7 904 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 GTPBP2Q9BX10 602 aaKnown RBP17.34■□□□□ 0.37
CTSB-222ENST00000531551 CAPN10Q9HC96 672 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 GPAMQ9HCL2 828 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 SNX15Q9NRS6 342 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 SPAG17Q6Q759 2223 aa17.34■□□□□ 0.37
CTSB-222ENST00000531551 KHNYNO15037 678 aaKnown RBP17.33■□□□□ 0.37
CTSB-222ENST00000531551 SNX2O60749 519 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 SASH3O75995 380 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 APOA4P06727 396 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 RETP07949 1114 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 MYZAPP0CAP1 466 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 SKIV2L2P42285 1042 aaKnown RBP17.33■□□□□ 0.37
CTSB-222ENST00000531551 PREPP48147 710 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 RAB10P61026 200 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 HNRNPKP61978 463 aaKnown RBP eCLIP17.33■□□□□ 0.37
CTSB-222ENST00000531551 IRX4P78413 519 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 IL9RQ01113 521 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 ILF3Q12906 894 aaKnown RBP eCLIP17.33■□□□□ 0.375e-7■■□□□ 12.5
CTSB-222ENST00000531551 SLC30A9Q6PML9 568 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 PAQR3Q6TCH7 311 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 GIMAP7Q8NHV1 300 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 CD200R1Q8TD46 325 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 LMX1AQ8TE12 382 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 ELF4Q99607 663 aaPredicted RBP17.33■□□□□ 0.37
CTSB-222ENST00000531551 TIMM29Q9BSF4 260 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 KCNH6Q9H252 994 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 VIPAS39Q9H9C1 493 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 TRNAU1APQ9NX07 287 aaKnown RBP17.33■□□□□ 0.37
CTSB-222ENST00000531551 GULP1Q9UBP9 304 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 DHRS7Q9Y394 339 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 LAMA1P25391 3075 aa17.33■□□□□ 0.37
CTSB-222ENST00000531551 MT-ND3P03897 115 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 ALDOAP04075 364 aaKnown RBP17.33■□□□□ 0.36
CTSB-222ENST00000531551 CELA2BP08218 269 aaPredicted RBP17.33■□□□□ 0.36
CTSB-222ENST00000531551 SYPP08247 313 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 AOAHP28039 575 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 ACTR1BP42025 376 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 ARRB1P49407 418 aaPredicted RBP17.33■□□□□ 0.36
CTSB-222ENST00000531551 ACTR1AP61163 376 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 RASA2Q15283 850 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 HLA-BQ31612 363 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 TTLL9Q3SXZ7 439 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 FAM83HQ6ZRV2 1179 aaPredicted RBP17.33■□□□□ 0.36
CTSB-222ENST00000531551 TAF8Q7Z7C8 310 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 CROCCP2Q86T23 111 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 CPNE9Q8IYJ1 553 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 OXR1Q8N573 874 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 HM13Q8TCT9 377 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 SKA2Q8WVK7 121 aaPredicted RBP17.33■□□□□ 0.36
CTSB-222ENST00000531551 ASZ1Q8WWH4 475 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 INPP5DQ92835 1189 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 TMEM159Q96B96 161 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 LRRC61Q9BV99 259 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 VPS11Q9H270 941 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 GAREM1Q9H706 876 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 COG4Q9H9E3 785 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 ERVMER34-1Q9H9K5 563 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 EURLQ9NYK6 297 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 TLK1Q9UKI8 766 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 ST14Q9Y5Y6 855 aa17.33■□□□□ 0.36
CTSB-222ENST00000531551 FRYLO94915 3013 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 C17orf113A0A1B0GUU1 675 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 A0A1W2PPM1 405 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 GOLGA8RI6L899 631 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 ARHGAP33O14559 1287 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 KPNA5O15131 536 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 LMNAP02545 664 aaKnown RBP17.32■□□□□ 0.36
CTSB-222ENST00000531551 RPL10P27635 214 aaKnown RBP17.32■□□□□ 0.36
CTSB-222ENST00000531551 GMPRP36959 345 aa17.32■□□□□ 0.36
CTSB-222ENST00000531551 ATXN3P54252 364 aaPredicted RBP17.32■□□□□ 0.36
CTSB-222ENST00000531551 LRP8Q14114 963 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms