RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 BRAFP15056 766 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 PNLIPP16233 465 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 SLC1A2P43004 574 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 FASLGP48023 281 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 LEPRP48357 1165 aaKnown RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 RPIAP49247 311 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 DUSP3P51452 185 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 NOVA1P51513 510 aaKnown RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 THOC5Q13769 683 aaKnown RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 NR0B2Q15466 257 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 TCEA2Q15560 299 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 PLA2G4EQ3MJ16 856 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 C14orf28Q4W4Y0 310 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 HSP90AA5PQ58FG0 334 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 ZNF789Q5FWF6 425 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 HP1BP3Q5SSJ5 553 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 TRMT10BQ6PF06 316 aaKnown RBP14.2□□□□□ -0.14
CPSF1-206ENST00000531480 KIAA0408Q6ZU52 694 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 ANKMY2Q8IV38 441 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 DENND6AQ8IWF6 608 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 SFTPA2Q8IWL1 248 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 PYROXD1Q8WU10 500 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 GLMNQ92990 594 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 DPEP2Q9H4A9 486 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 VPS37BQ9H9H4 285 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 SAYSD1Q9NPB0 183 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 FBXO5Q9UKT4 447 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 ACSL5Q9ULC5 683 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 KIR2DS5A0A0G2JLQ3 304 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 A0A0G2JNG1 304 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 F8W8V4 182 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 KIR2DS3K7RE56 304 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 PFDN6O15212 129 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 NUDT21O43809 227 aaKnown RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 NDUFS3O75489 264 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 FTH1P02794 183 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 ESR1P03372 595 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 ERVK-10P10266 1014 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CDK4P11802 303 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 SLC2A4P14672 509 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 GLB1P16278 677 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 XRCC1P18887 633 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 IDSP22304 550 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 PMLP29590 882 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 MAGEA4P43358 317 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CARSP49589 748 aaKnown RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 GPX6P59796 221 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 RPA4Q13156 261 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 DNAJC3Q13217 504 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CTBP1Q13363 440 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 NFE2L1Q14494 772 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 KIR2DS5Q14953 304 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 BRD3Q15059 726 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CTSL3PQ5NE16 218 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 TEDDM1Q5T9Z0 273 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 ARL14Q8N4G2 192 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 GABPB2Q8TAK5 448 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 NAT6Q93015 286 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CNTNAP3BQ96NU0 1288 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 MCMBPQ9BTE3 642 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 CNTNAP3Q9BZ76 1288 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 OR52A5Q9H2C5 316 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 COG4Q9H9E3 785 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 PRDM8Q9NQV8 689 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 LATS2Q9NRM7 1088 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 EVA1BQ9NVM1 165 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 SCHIP1Q9P0W5 487 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-206ENST00000531480 GNPTGQ9UJJ9 305 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 PADI4Q9UM07 663 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 PCDHB1Q9Y5F3 818 aa14.19□□□□□ -0.14
CPSF1-206ENST00000531480 SLC5A10A0PJK1 596 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 B4DGG1 531 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 H3BMM5 538 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 LIN7AO14910 233 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 GPC4O75487 556 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 ADRB1P08588 477 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 FTH1P19P0C7X4 201 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 GABRB3P28472 473 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 TNFRSF8P28908 595 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 UBE2IP63279 158 aaKnown RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 PLOD1Q02809 727 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 GBX1Q14549 363 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 CAPRIN2Q6IMN6 1127 aaKnown RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 GUSBP11Q6P575 273 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 SLCO6A1Q86UG4 719 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 LILRA3Q8N6C8 439 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 AVL9Q8NBF6 648 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 SLC37A2Q8TED4 501 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 PATE1Q8WXA2 126 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 FMO2Q99518 471 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 FUT8Q9BYC5 575 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 UCK1Q9HA47 277 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 LRRC4CQ9HCJ2 640 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 SARS2Q9NP81 518 aaKnown RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
CPSF1-206ENST00000531480 MTRF1LQ9UGC7 380 aaKnown RBP14.18□□□□□ -0.14
CPSF1-206ENST00000531480 CDYLQ9Y232 598 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms