RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 TMEM175Q9BSA9 504 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TMEM109Q9BVC6 243 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 EBPLQ9BY08 206 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ALG2Q9H553 416 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 NMUR1Q9HB89 426 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PNPLA8Q9NP80 782 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 IRAK3Q9Y616 596 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 GPC6Q9Y625 555 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ARL5AQ9Y689 179 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 LMO2P25791 158 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PTX3P26022 381 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 HSD17B2P37059 387 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 BCAP31P51572 246 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CYP4F8P98187 520 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 POU5F1Q01860 360 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ATXN7L2Q5T6C5 722 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TMEM220Q6QAJ8 160 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PRSS55Q6UWB4 352 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 HPS6Q86YV9 775 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TMEM139Q8IV31 216 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PARP8Q8N3A8 854 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 DNAJB8Q8NHS0 232 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 NARS2Q96I59 477 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SLC28A3Q9HAS3 691 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 UBAP1Q9NZ09 502 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 FBXW2Q9UKT8 454 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PGRMC2O15173 223 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 AHCYL1O43865 530 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ESR1P03372 595 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 IFNW1P05000 195 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 INHAP05111 366 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CSKP41240 450 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 FASTKD3Q14CZ7 662 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PLEKHG4Q58EX7 1191 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 FSTL4Q6MZW2 842 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 MCEMP1Q8IX19 187 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PEX5LQ8IYB4 626 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CADM2Q8N3J6 435 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PDPRQ8NCN5 879 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 NEK7Q8TDX7 302 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PSMG2Q969U7 264 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 C5orf34Q96MH7 638 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PRICKLE1Q96MT3 831 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 KLHL32Q96NJ5 620 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CHID1Q9BWS9 393 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 MRPS30Q9NP92 439 aaKnown RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 FKBPLQ9UIM3 349 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 MAGEB17A8MXT2 336 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RNF225M0QZC1 329 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PIP5K1BO14986 540 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PDPK1O15530 556 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 LDOC1O95751 146 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SAGP10523 405 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-227ENST00000530748 THRBP10828 461 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 ALAS2P22557 587 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 RPS6KA3P51812 740 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 VBP1P61758 197 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SP2Q02086 613 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TPGS2Q68CL5 300 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 PAOXQ6QHF9 649 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 SNX20Q7Z614 316 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 TFAP2BQ92481 460 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
CTNND1-227ENST00000530748 CDH3P22223 829 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 PRR5P85299 388 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 DMPKQ09013 629 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 DLG1Q12959 904 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 IL18Q14116 193 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 CLNKQ7Z7G1 428 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 POLMQ9NP87 494 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 COPS7AQ9UBW8 275 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 MAN2B2Q9Y2E5 1009 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FAM25EA8MYX2 175 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 NSG1P42857 185 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 SLC1A2P43004 574 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 DNASE1L1P49184 302 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 HSPB3Q12988 150 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 METTL21CQ5VZV1 264 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FAM91A1Q658Y4 838 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 CXorf57Q6NSI4 855 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 VITQ6UXI7 678 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 LCN9Q8WX39 176 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 MCRS1Q96EZ8 462 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 SLC35G5Q96KT7 338 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF599Q96NL3 588 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ACSS2Q9NR19 701 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF282Q9UDV7 671 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 WBP11Q9Y2W2 641 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms