RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLITRK4Q8IW52 837 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TRIM48Q8IWZ4 208 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CXorf40BQ96DE9 158 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 SIGLEC10Q96LC7 697 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TMEM74Q96NL1 305 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 KRT12Q99456 494 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 FOXP3Q9BZS1 431 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CCDC86Q9H6F5 360 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 VPS37BQ9H9H4 285 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 RDH14Q9HBH5 336 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CATSPERZQ9NTU4 200 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 POT1Q9NUX5 634 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 SAMD15Q9P1V8 674 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 DKK4Q9UBT3 224 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 PSMD13Q9UNM6 376 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 TPRP12270 2363 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 ACACBO00763 2458 aa12.42□□□□□ -0.42
CCDC90B-216ENST00000529856 PRAMEF33A0A0G2JMD5 474 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 LILRA5A6NI73 299 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 QSOX1O00391 747 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 TTI1O43156 1089 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 VAPBO95292 243 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 POLBP06746 335 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 ARCN1P48444 511 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 LSSP48449 732 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 TTPAP49638 278 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 INHBCP55103 352 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 ANKRD20A4Q4UJ75 823 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 IZUMO3Q5VZ72 239 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 KIAA0930Q6ICG6 404 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 CAPRIN2Q6IMN6 1127 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 ZNF574Q6ZN55 896 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 LDB1Q86U70 411 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 TMEM135Q86UB9 458 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 RBM12BQ8IXT5 1001 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 OR10G6Q8NH81 332 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 MDM1Q8TC05 714 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 HM13Q8TCT9 377 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 NXPE2Q96DL1 559 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 AHCYL2Q96HN2 611 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 DPYSL5Q9BPU6 564 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 NUDT22Q9BRQ3 303 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 TRIM56Q9BRZ2 755 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 TBC1D10AQ9BXI6 508 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 STRADBQ9C0K7 418 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 WWP1Q9H0M0 922 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 SEMA6CQ9H3T2 930 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 COG4Q9H9E3 785 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 POLR1BQ9H9Y6 1135 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 MARCH4Q9P2E8 410 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 FAM8A1Q9UBU6 413 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 AK5Q9Y6K8 562 aa12.41□□□□□ -0.42
CCDC90B-216ENST00000529856 KIF26BQ2KJY2 2108 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 CCDC187A0A096LP49 1063 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 A0A1W2PNU3 283 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 F8W8V4 182 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 FTH1P02794 183 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 MPOP05164 745 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 OR56A5P0C7T3 313 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 CSF2RBP32927 897 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 LIMK2P53671 638 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 MORF4L2Q15014 288 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 TMEM71Q6P5X7 295 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 WDR74Q6RFH5 385 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 OR4D9Q8NGE8 314 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 GPR150Q8NGU9 434 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 WDR36Q8NI36 951 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 ZFPM2Q8WW38 1151 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 C16orf45Q96MC5 204 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 TRIM51Q9BSJ1 452 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 PDP2Q9P2J9 529 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 SATB2Q9UPW6 733 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
CCDC90B-216ENST00000529856 ASPMQ8IZT6 3477 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 IGHV5-10-1A0A0J9YXX1 117 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 ZCWPW2A0A1B0GU75 182 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 GOLGA8TH3BQL2 631 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 SMAPO00193 183 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 TAF4O00268 1085 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 PRMT5O14744 637 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 LIN7AO14910 233 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 DUX1O43812 170 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 NDUFS3O75489 264 aa12.39□□□□□ -0.43
CCDC90B-216ENST00000529856 USP1O94782 785 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms