RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 PRKCZQ05513 592 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 FOXI1Q12951 378 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 GAMTQ14353 236 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PTPAQ15257 358 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SYT16Q17RD7 645 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 EIF2S3LQ2VIR3 472 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 FAM174BQ3ZCQ3 159 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 CERKLQ49MI3 558 aaPredicted RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MIDNQ504T8 468 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 DCST1Q5T197 706 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 C12orf60Q5U649 245 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 ZDHHC20Q5W0Z9 365 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 OLFM4Q6UX06 510 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MFSD7Q6UXD7 560 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF534Q76KX8 674 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MEPCEQ7L2J0 689 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 TRAPPC11Q7Z392 1133 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 GRASPQ7Z6J2 395 aaPredicted RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 EXOC3L1Q86VI1 746 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 CAMK1DQ8IU85 385 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 FOXP4Q8IVH2 680 aaPredicted RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 CCDC83Q8IWF9 413 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 ELMOD2Q8IZ81 293 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 BEST3Q8N1M1 668 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF611Q8N823 705 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 BOLLQ8N9W6 283 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PAPD5Q8NDF8 572 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MAP4K1Q92918 833 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 RIT1Q92963 219 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MRPL38Q96DV4 380 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF503Q96F45 646 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 GRAMD2BQ96HH9 432 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PRMT6Q96LA8 375 aaPredicted RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PLEKHG4BQ96PX9 1271 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 TIMP4Q99727 224 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PKP2Q99959 881 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 C16orf70Q9BSU1 422 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 EFHD1Q9BUP0 239 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 GTPBP2Q9BX10 602 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 TEX13BQ9BXU2 312 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 P2RY12Q9H244 342 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SRD5A3Q9H8P0 318 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SEBOXQ9HB31 216 aaPredicted RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SYTL2Q9HCH5 934 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MYNNQ9NPC7 610 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 KLHL1Q9NR64 748 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC2A4RGQ9NR83 387 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 POLE3Q9NRF9 147 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 PNPLA3Q9NST1 481 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 TMEM161AQ9NX61 479 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SLCO1C1Q9NYB5 712 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 STK26Q9P289 416 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 MTUS1Q9ULD2 1270 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 RNF150Q9ULK6 438 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 AURKCQ9UQB9 309 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 RRP15Q9Y3B9 282 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 STRAPQ9Y3F4 350 aaKnown RBP3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 IKBKGQ9Y6K9 419 aa3.47□□□□□ -1.85
AMBRA1-208ENST00000529558 SYNJ2BP-COX16A0A087WUM0 186 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 C13orf42A0A1B0GVH6 325 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 ELOVL7A1L3X0 281 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 FAM90A10PA6NDY2 464 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 STMND1H3BQB6 276 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 TMEM189-UBE2V1I3L0A0 370 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 AP5Z1O43299 807 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 XRCC3O43542 346 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 CRCPO75575 148 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 RNF8O76064 485 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 PGLSO95336 258 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 EGFP01133 1207 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 ABHD2P08910 425 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 OR2T7P0C7T2 308 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 NHLRC4P0CG21 123 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SPP1P10451 314 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 ETS1P14921 441 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 LBPP18428 481 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 UGT1A1P22309 533 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 PSMB4P28070 264 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 CCND3P30281 292 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SLC6A6P31641 620 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SERPINB6P35237 376 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 PIGAP37287 484 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 APOBEC1P41238 236 aaKnown RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 CAMLGP49069 296 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 RARRES1P49788 294 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 RGS7P49802 495 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 HTR6P50406 440 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SERPINH1P50454 418 aaKnown RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 CDH12P55289 794 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SOX10P56693 466 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 TMPRSS3P57727 454 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 GMFBP60983 142 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 CSNK2A1P68400 391 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 KCNJ10P78508 379 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 GFPT1Q06210 699 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 GAGE2BQ13066 116 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 MAD2L1Q13257 205 aaPredicted RBP3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 UBE2V1Q13404 147 aa3.46□□□□□ -1.86
AMBRA1-208ENST00000529558 STIM1Q13586 685 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms