RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 GLB1L3Q8NCI6 653 aaPredicted RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 TIFAQ96CG3 184 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 ASIC4Q96FT7 647 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 LRIG1Q96JA1 1093 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 ZNF597Q96LX8 424 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 KLHL32Q96NJ5 620 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 GBP5Q96PP8 586 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 SMIM14Q96QK8 99 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 KCNA7Q96RP8 456 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 COPS8Q99627 209 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 CENPKQ9BS16 269 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 BEGAINQ9BUH8 593 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 TM6SF2Q9BZW4 377 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 EPB41L1Q9H4G0 881 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 C11orf49Q9H6J7 331 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 NOL11Q9H8H0 719 aaKnown RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 COPS7BQ9H9Q2 264 aaPredicted RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 SARS2Q9NP81 518 aaKnown RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 IL23AQ9NPF7 189 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 NFKBIL1Q9UBC1 381 aaPredicted RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 HECAQ9UBI9 543 aaPredicted RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 TRPS1Q9UHF7 1281 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 EIF2B4Q9UI10 523 aaKnown RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 INTS6Q9UL03 887 aaKnown RBP10.54□□□□□ -0.72
PUF60-213ENST00000528999 PADI4Q9UM07 663 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 INSL6Q9Y581 213 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
PUF60-213ENST00000528999 PLXNA4Q9HCM2 1894 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 DNAH12Q6ZR08 3092 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 SMIM31A0A1B0GVY4 71 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 K7EPI3 171 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 FXYD1O00168 92 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 QSOX1O00391 747 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 OR7A17O14581 309 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 RNASEH1O60930 286 aaKnown RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 OR4F21O95013 312 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 POU2F2P09086 479 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ALPIP09923 528 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 OR56A5P0C7T3 313 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 CYP2A6P11509 494 aaPredicted RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 ZNF26P17031 533 aaPredicted RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 CAPN3P20807 821 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 JAK1P23458 1154 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 HTR1EP28566 365 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 CD70P32970 193 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 MAPK9P45984 424 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 HNMTP50135 292 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 DCDC1P59894 354 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 CYP4F8P98187 520 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ECT2LQ008S8 904 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 SP140Q13342 867 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 NFYCQ13952 458 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 LRRC36Q1X8D7 754 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 MTX3Q5HYI7 312 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 C6orf10Q5SRN2 563 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 PLEKHS1Q5SXH7 462 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 INTS11Q5TA45 600 aaKnown RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 IL23RQ5VWK5 629 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 C22orf39Q6P5X5 142 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 UGT2A3Q6UWM9 527 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ZFAND4Q86XD8 727 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 HID1Q8IV36 788 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 RNF148Q8N7C7 305 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 ZNF784Q8NCA9 323 aaPredicted RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 PAPD5Q8NDF8 572 aaKnown RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 TRPV3Q8NET8 790 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 TMEM125Q96AQ2 219 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ZBTB18Q99592 522 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 SH3GL1Q99961 368 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 SMOXQ9NWM0 555 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 OPTCQ9UBM4 332 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 EIF3LQ9Y262 564 aaKnown RBP10.53□□□□□ -0.72
PUF60-213ENST00000528999 BTRCQ9Y297 605 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 ANGPTL3Q9Y5C1 460 aa10.53□□□□□ -0.72
PUF60-213ENST00000528999 A0A1W2PRU2 124 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 NCF1BA6NI72 391 aaPredicted RBP10.52□□□□□ -0.73
PUF60-213ENST00000528999 IQCF5A8MTL0 148 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 NCF1CA8MVU1 366 aaPredicted RBP10.52□□□□□ -0.73
PUF60-213ENST00000528999 NME4O00746 187 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 SLC9A3R1O14745 358 aaPredicted RBP10.52□□□□□ -0.73
PUF60-213ENST00000528999 TAPBPO15533 448 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 NUAK1O60285 661 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 TRIM16O95361 564 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 TNFAIP8O95379 198 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 CAPN1P07384 714 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 ANXA5P08758 320 aa10.52□□□□□ -0.73
PUF60-213ENST00000528999 HNRNPA1P09651 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
PUF60-213ENST00000528999 UBTFL6P0CB48 400 aaPredicted RBP10.52□□□□□ -0.73
PUF60-213ENST00000528999 NCF1P14598 390 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms