RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-211ENST00000528484 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
CMTM1-211ENST00000528484 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 CSMD1Q96PZ7 3565 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 KLHL33A6NCF5 533 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 MATN2O00339 956 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 POP7O75817 140 aaKnown RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 NDST3O95803 873 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 CYP1A2P05177 515 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 PYGMP11217 842 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 AGXTP21549 392 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 CDH3P22223 829 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 SPAM1P38567 509 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ARSEP51690 589 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 DMPKQ09013 629 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 GPS2Q13227 327 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 GSE1Q14687 1217 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 PDK1Q15118 436 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 NR6A1Q15406 480 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 GPR19Q15760 415 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 SLC14A2Q15849 920 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 LONRF2Q1L5Z9 754 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 VWA5B1Q5TIE3 1220 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 DSELQ8IZU8 1212 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 GLIS1Q8NBF1 620 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 CLEC1AQ8NC01 280 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 GPR150Q8NGU9 434 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 LRRN4Q8WUT4 740 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ZFPM2Q8WW38 1151 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ZNF501Q96CX3 271 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 EID2BQ96D98 161 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 MOCOSQ96EN8 888 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 IMP4Q96G21 291 aaKnown RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 FER1L6-AS2Q96M78 137 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 DPH2Q9BQC3 489 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 NUDT9Q9BW91 350 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ILKAPQ9H0C8 392 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 AKIRIN1Q9H9L7 192 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-211ENST00000528484 BPIFA1Q9NP55 256 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 ACSL5Q9ULC5 683 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 WDR37Q9Y2I8 494 aa11.28□□□□□ -0.6
CMTM1-211ENST00000528484 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.6
CMTM1-211ENST00000528484 ANKUB1A6NFN9 424 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 GOLGA6L22H0YM25 854 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 PEX12O00623 359 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 IPO13O94829 963 aaKnown RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 HBQ1P09105 142 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 SLC35G4P0C7Q5 338 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 RNF224P0DH78 156 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ZFXP17010 805 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 HLA-DPA1P20036 260 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 MSH3P20585 1137 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 COL8A1P27658 744 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 NDUFS1P28331 727 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 PBLDP30039 288 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 AKT1P31749 480 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 PER3P56645 1201 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ZBTB17Q13105 803 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 E4F1Q66K89 784 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 TMEM220Q6QAJ8 160 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ZNF517Q6ZMY9 492 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 C11orf96Q7Z7L8 435 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 SYTL1Q8IYJ3 562 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 SLC34A3Q8N130 599 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ADAMTS17Q8TE56 1095 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 N4BP2L2Q92802 583 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 FAF2Q96CS3 445 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 C12orf66Q96MD2 445 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 TRIB3Q96RU7 358 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 SMAD5Q99717 465 aaKnown RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 DHRS4Q9BTZ2 278 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 TLR10Q9BXR5 811 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ACTR5Q9H9F9 607 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 GPN3Q9UHW5 284 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 SERTAD3Q9UJW9 196 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 BTRCQ9Y297 605 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 B3GNT3Q9Y2A9 372 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 PKP3Q9Y446 797 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.61
CMTM1-211ENST00000528484 CFAP20Q9Y6A4 193 aaKnown RBP11.27□□□□□ -0.61
CMTM1-211ENST00000528484 A0A0A6YYK5 440 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-211ENST00000528484 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 OR6C74A6NCV1 312 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 OR2AG2A6NM03 316 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 TMEM150CB9EJG8 249 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 APOL1O14791 398 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 PMPCBO75439 489 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 PROSCO94903 275 aa11.26□□□□□ -0.61
CMTM1-211ENST00000528484 SERPINC1P01008 464 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms