RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PLEKHN1Q494U1 663 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 CRTC2Q53ET0 693 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 ALG1LQ6GMV1 187 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 JMJD6Q6NYC1 403 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 ALKBH5Q6P6C2 394 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 FAM151BQ6UXP7 276 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 PRSS42Q7Z5A4 293 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 C11orf96Q7Z7L8 435 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 AMZ2Q86W34 360 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RFX6Q8HWS3 928 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 APLFQ8IW19 511 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 MAP7D3Q8IWC1 876 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 ENDOVQ8N8Q3 282 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 NIPA2Q8N8Q9 360 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RASGEF1AQ8N9B8 481 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 AVL9Q8NBF6 648 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 PHC3Q8NDX5 983 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 FDCSPQ8NFU4 85 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SPDYE1Q8NFV5 336 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 OR4E2Q8NGC2 313 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 FAM71BQ8TC56 605 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CLIP3Q96DZ5 547 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 TCTN2Q96GX1 697 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SLC41A2Q96JW4 573 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 ZNF514Q96K75 400 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 CALR3Q96L12 384 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 CCDC42Q96M95 316 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 C12orf66Q96MD2 445 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RNF157Q96PX1 679 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 TRIB3Q96RU7 358 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 INSM2Q96T92 566 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 ZSCAN5AQ9BUG6 496 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 NUDT9Q9BW91 350 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 MAK16Q9BXY0 300 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 PACSIN1Q9BY11 444 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 WWP1Q9H0M0 922 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 DEF6Q9H4E7 631 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 UCK1Q9HA47 277 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 MAGEE1Q9HCI5 957 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 POT1Q9NUX5 634 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SAE1Q9UBE0 346 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 LCMT1Q9UIC8 334 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SNX7Q9UNH6 387 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RPL26L1Q9UNX3 145 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 HYOU1Q9Y4L1 999 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 PCDHGA6Q9Y5G7 932 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 FLNCQ14315 2725 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 MED13Q9UHV7 2174 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 C21orf140B9A014 251 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 TOX3O15405 576 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 LDB2O43679 373 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 TMEM63AO94886 807 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 PROSCO94903 275 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 NDST3O95803 873 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 CLDN1O95832 211 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 KLK3P07288 261 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 SPTBP11277 2137 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 PVRP15151 417 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 VCLP18206 1134 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 CDH3P22223 829 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 OTX2P32243 289 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 ITGA1P56199 1179 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 HSD11B2P80365 405 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 PDK2Q15119 407 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 NR6A1Q15406 480 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 SLC18A3Q16572 532 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 PLEKHS1Q5SXH7 462 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 FNBP1LQ5T0N5 605 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 GPRC6AQ5T6X5 926 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 AGAP9Q5VTM2 703 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 C1orf189Q5VU69 101 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 MLIPQ5VWP3 458 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 KAZNQ674X7 775 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 SLC6A19Q695T7 634 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 WASH2PQ6VEQ5 465 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 SYVN1Q86TM6 617 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 TMEM151BQ8IW70 566 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 RHOT1Q8IXI2 618 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 CFAP206Q8IYR0 622 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 ZBTB2Q8N680 514 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 LILRA3Q8N6C8 439 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 PLD5Q8N7P1 536 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 Q8NA96 180 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 BLOC1S5Q8TDH9 187 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 UBE2Q2Q8WVN8 375 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 THAP4Q8WY91 577 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 UBXN4Q92575 508 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 HDAC11Q96DB2 347 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 IMP4Q96G21 291 aaKnown RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 ZNF830Q96NB3 372 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 FERD3LQ96RJ6 166 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 BAG1Q99933 345 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 ZNF670Q9BS34 389 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 TIMM29Q9BSF4 260 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms