RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CHMP1AQ9HD42 196 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 IL1RAPL2Q9NP60 686 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM51Q9NW97 253 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 OR6C3Q9NZP0 311 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 CACNG4Q9UBN1 327 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM221A6NGB7 291 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 HSPA12AO43301 675 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SOX30O94993 753 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 NDUFB8O95169 186 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 PSG1P11464 419 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 EEF2P13639 858 aaKnown RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 CYP11B2P19099 503 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SCP2P22307 547 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SP100P23497 879 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 ATP6V1E1P36543 226 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 ALDH7A1P49419 539 aaKnown RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 MZT1Q08AG7 82 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 INPP5JQ15735 1006 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 C2orf76Q3KRA6 126 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 DCST1Q5T197 706 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 FAM91A1Q658Y4 838 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF449Q6P9G9 518 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 NHLRC1Q6VVB1 395 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 GBP6Q6ZN66 633 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SLC16A12Q6ZSM3 486 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SHFQ7M4L6 423 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 TIGD4Q8IY51 512 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 AADATQ8N5Z0 425 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 EXD1Q8NHP7 514 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 C9orf43Q8TAL5 461 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 TBC1D16Q8TBP0 767 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM174Q8WUU8 243 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 ATL1Q8WXF7 558 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SEPT1Q8WYJ6 367 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 RSPH1Q8WYR4 309 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SLC25A28Q96A46 364 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 EXOC4Q96A65 974 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 SPSB1Q96BD6 273 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 NLRP4Q96MN2 994 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 CCDC43Q96MW1 224 aaKnown RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 CAMK1GQ96NX5 476 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 POLDIP3Q9BY77 421 aaKnown RBP4.45□□□□□ -1.7
CSDE1-211ENST00000525970 RAD21L1Q9H4I0 556 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 MID1IP1Q9NPA3 183 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 TINAGQ9UJW2 476 aa4.45□□□□□ -1.7
CSDE1-211ENST00000525970 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM272A0A1B0GTI8 110 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 OOEPA6NGQ2 149 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 C5orf52A6NGY3 159 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 B4DGG1 531 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 I6L893 689 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 J3QR06 171 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 DDX39AO00148 427 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 TO15178 435 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 OR10H2O60403 315 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GCNT3O95395 438 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 ITGB8P26012 769 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 TIA1P31483 386 aaKnown RBP eCLIP4.44□□□□□ -1.74e-7■■■□□ 15
CSDE1-211ENST00000525970 CASP3P42574 277 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 AMPHP49418 695 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 P2RX3P56373 397 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 CDK3Q00526 305 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 HSPB3Q12988 150 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 MAD2L1Q13257 205 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 NR1D2Q14995 579 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 RRS1Q15050 365 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 MEP1AQ16819 746 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 RAB6CQ53S08 254 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 KRT39Q6A163 491 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GAGE2AQ6NT46 116 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 DUS1LQ6P1R4 473 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 FIGLAQ6QHK4 219 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 MOXD1Q6UVY6 613 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM173Q86WV6 379 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 SYCP3Q8IZU3 236 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GCSAMQ8N6F7 178 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 PCDH20Q8N6Y1 951 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 NHLRC2Q8NBF2 726 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 PAPD5Q8NDF8 572 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 INPP5DQ92835 1189 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GFM1Q96RP9 751 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 C16orf70Q9BSU1 422 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 RAB6CQ9H0N0 254 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 FAM234AQ9H0X4 552 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 CNGB3Q9NQW8 809 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 SLC24A2Q9UI40 661 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 PADI3Q9ULW8 664 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 PA2G4Q9UQ80 394 aaKnown RBP4.44□□□□□ -1.7
CSDE1-211ENST00000525970 B3GALT5Q9Y2C3 310 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 PCDHGA1Q9Y5H4 931 aa4.44□□□□□ -1.7
CSDE1-211ENST00000525970 LRRD1A4D1F6 860 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ANKUB1A6NFN9 424 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms