RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MTHFD1P11586 935 aaKnown RBP23.4■■□□□ 1.34
USP47-205ENST00000525257 CHRNA4P43681 627 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 CCL11P51671 97 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 WNT3AP56704 352 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 HSD11B2P80365 405 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 XRCC4Q13426 336 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 LAMB3Q13751 1172 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 GPR19Q15760 415 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 SIRPB2Q5JXA9 342 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 FHL5Q5TD97 284 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 DUS1LQ6P1R4 473 aaKnown RBP23.4■■□□□ 1.34
USP47-205ENST00000525257 TMEM126BQ8IUX1 230 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 SLC35G2Q8TBE7 412 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 CD180Q99467 661 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 TRABDQ9H4I3 376 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 HRASLS2Q9NWW9 162 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 FAM153AQ9UHL3 310 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 FARSAQ9Y285 508 aaKnown RBP23.4■■□□□ 1.34
USP47-205ENST00000525257 MED13Q9UHV7 2174 aa23.4■■□□□ 1.34
USP47-205ENST00000525257 GLYATL1P3A0A0U1RQE8 302 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 LOC285095A0A1B0GVY8 99 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 TNNT1P13805 278 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 NFKB1P19838 968 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 CD68P34810 354 aaPredicted RBP23.39■■□□□ 1.33
USP47-205ENST00000525257 TUBB4BP68371 445 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 GPS2Q13227 327 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 TUBB2AQ13885 445 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 PRKD1Q15139 912 aaPredicted RBP23.39■■□□□ 1.33
USP47-205ENST00000525257 ODF2Q5BJF6 829 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 GPRC6AQ5T6X5 926 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 ZDHHC20Q5W0Z9 365 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 KDELC1Q6UW63 502 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 D2HGDHQ8N465 521 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 DDHD1Q8NEL9 900 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 BLOC1S5Q8TDH9 187 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 TUBB2BQ9BVA1 445 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 ING2Q9H160 280 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 IL17CQ9P0M4 197 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 IFNKQ9P0W0 207 aa23.39■■□□□ 1.33
USP47-205ENST00000525257 SAE1Q9UBE0 346 aaPredicted RBP23.39■■□□□ 1.33
USP47-205ENST00000525257 PLEKHB1Q9UF11 243 aaPredicted RBP23.39■■□□□ 1.33
USP47-205ENST00000525257 PCDHGA9Q9Y5G4 932 aaKnown RBP23.39■■□□□ 1.33
USP47-205ENST00000525257 HNRNPH3P31942 346 aaKnown RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 PTGIRP43119 386 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 TNNT3P45378 269 aaPredicted RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 ARCN1P48444 511 aaKnown RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 FNBP1LQ5T0N5 605 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 DET1Q7L5Y6 550 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 GLT6D1Q7Z4J2 308 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 OOSP2Q86WS3 158 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 BEND7Q8N7W2 519 aaPredicted RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 DTX3LQ8TDB6 740 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 INSM2Q96T92 566 aaPredicted RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 WWP1Q9H0M0 922 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 DEF6Q9H4E7 631 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 FAM8A1Q9UBU6 413 aa23.38■■□□□ 1.33
USP47-205ENST00000525257 DNMT3AQ9Y6K1 912 aaPredicted RBP23.38■■□□□ 1.33
USP47-205ENST00000525257 SHANK1Q9Y566 2161 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 OR6C74A6NCV1 312 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 GAPDHSO14556 408 aaPredicted RBP23.37■■□□□ 1.33
USP47-205ENST00000525257 AKT1P31749 480 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 WASHC5Q12768 1159 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 ASTE1Q2TB18 679 aaPredicted RBP23.37■■□□□ 1.33
USP47-205ENST00000525257 METRNLQ641Q3 311 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 ARMC6Q6NXE6 501 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 FBXO38Q6PIJ6 1188 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 MFSD7Q6UXD7 560 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 SLC38A9Q8NBW4 561 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 NAT14Q8WUY8 206 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 TFB1MQ8WVM0 346 aaKnown RBP23.37■■□□□ 1.33
USP47-205ENST00000525257 ZNF501Q96CX3 271 aaPredicted RBP23.37■■□□□ 1.33
USP47-205ENST00000525257 C12orf66Q96MD2 445 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 PPM1MQ96MI6 270 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 CHST8Q9H2A9 424 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 MLXIPLQ9NP71 852 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 KCND1Q9NSA2 647 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 SOHLH2Q9NX45 425 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.37■■□□□ 1.33
USP47-205ENST00000525257 HACD3Q9P035 362 aa23.37■■□□□ 1.33
USP47-205ENST00000525257 DDX3YO15523 660 aaKnown RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 SORBS2O94875 1100 aaKnown RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 ZBTB11O95625 1053 aaPredicted RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 PECAM1P16284 738 aaPredicted RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 ARHGAP25P42331 645 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 ITGA9Q13797 1035 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 TMTC4Q5T4D3 741 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 IPMKQ8NFU5 416 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 OXNAD1Q96HP4 312 aaPredicted RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 MRGPRX2Q96LB1 330 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 KLHL8Q9P2G9 620 aaPredicted RBP23.36■■□□□ 1.33
USP47-205ENST00000525257 SLC24A2Q9UI40 661 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 PKP3Q9Y446 797 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 MAP4K5Q9Y4K4 846 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 HYOU1Q9Y4L1 999 aa23.36■■□□□ 1.33
USP47-205ENST00000525257 MYO9AB2RTY4 2548 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 SYCE3A1L190 88 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 MSH3P20585 1137 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 KPNA2P52292 529 aaKnown RBP23.35■■□□□ 1.33
USP47-205ENST00000525257 PTPRCAPQ14761 206 aa23.35■■□□□ 1.33
USP47-205ENST00000525257 LLGL1Q15334 1064 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms