RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SARDHQ9UL12 918 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ZNF711Q9Y462 761 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PCDHGA5Q9Y5G8 931 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SPO11Q9Y5K1 396 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ARL5AQ9Y689 179 aa7□□□□□ -1.29
VPS11-201ENST00000524454 OAS3Q9Y6K5 1087 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 PIEZO1Q92508 2521 aa7□□□□□ -1.29
VPS11-201ENST00000524454 EP300Q09472 2414 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 DNAH14Q0VDD8 3507 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ZNF292O60281 2723 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 DOCK9Q9BZ29 2069 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 RIF1Q5UIP0 2472 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 A0A0G2JND7 137 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 EDDM13A0A1B0GTR0 161 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 WDR91A4D1P6 747 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 KHNYNO15037 678 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 HDAC3O15379 428 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 LRP3O75074 770 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 VPS26AO75436 327 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 NDUFS3O75489 264 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 ZNF821O75541 412 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 RNASEH2AO75792 299 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 IPO13O94829 963 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 UBOX5O94941 541 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PDHA1P08559 390 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 SBK3P0C264 359 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 ITGALP20701 1170 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CALB2P22676 271 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PRDX6P30041 224 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 SLC8A1P32418 973 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 NNMTP40261 264 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 NCALDP61601 193 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 XIAPP98170 497 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CDC16Q13042 620 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 DLG2Q15700 870 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CST6Q15828 149 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 MYLK3Q32MK0 819 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 UAP1L1Q3KQV9 507 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CARD16Q5EG05 197 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CDKL4Q5MAI5 379 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 STPG1Q5TH74 334 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 TTC23LQ6PF05 361 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CNSTQ6PJW8 725 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 DGLUCYQ7Z3D6 616 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 SNX20Q7Z614 316 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PTAR1Q7Z6K3 402 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CEP97Q8IW35 865 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CCDC116Q8IYX3 515 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 RBFAQ8N0V3 343 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PLD6Q8N2A8 252 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 AADATQ8N5Z0 425 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CHST14Q8NCH0 376 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 OR13C4Q8NGS5 318 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 HEXDCQ8WVB3 486 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 ULK4Q96C45 1275 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 SORT1Q99523 831 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CCT7Q99832 543 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 GTPBP2Q9BX10 602 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 ILKAPQ9H0C8 392 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 RSPH9Q9H1X1 276 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 P2RY12Q9H244 342 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 C1orf21Q9H246 121 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 CAB39LQ9H9S4 337 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 ZFYVE1Q9HBF4 777 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 FBXO6Q9NRD1 293 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 LATS2Q9NRM7 1088 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 SMOXQ9NWM0 555 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 FBXL12Q9NXK8 326 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 MARCH4Q9P2E8 410 aaPredicted RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 XPR1Q9UBH6 696 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 EIF2B4Q9UI10 523 aaKnown RBP6.99□□□□□ -1.29
VPS11-201ENST00000524454 TRIM33Q9UPN9 1127 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 STK38LQ9Y2H1 464 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PCDHGC4Q9Y5F7 938 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 GVINP1Q7Z2Y8 2422 aa6.99□□□□□ -1.29
VPS11-201ENST00000524454 PI4KAP42356 2102 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 WDR87Q6ZQQ6 2873 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 MED19A0JLT2 244 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 TRPC5OSA6NMA1 111 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 C4orf47A7E2U8 309 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PRR5-ARHGAP8B1AHC4 643 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 H0YHG0 523 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 STX16-NPEPL1H3BU86 382 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PSMD11O00231 422 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 MATN2O00339 956 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 QSOX1O00391 747 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 STX16O14662 325 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 PRMT5O14744 637 aaPredicted RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 PHGDHO43175 533 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 RNASEH1O60930 286 aaKnown RBP6.98□□□□□ -1.29
VPS11-201ENST00000524454 KERAO60938 352 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 SMIM24O75264 130 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 RASSF9O75901 435 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 SEMA4FO95754 770 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 HSPA4LO95757 839 aa6.98□□□□□ -1.29
VPS11-201ENST00000524454 CTSLP07711 333 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms