RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 MFSD3Q96ES6 412 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 LIN37Q96GY3 246 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 ZNF514Q96K75 400 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 TRIM56Q9BRZ2 755 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 COG4Q9H9E3 785 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 CATSPERZQ9NTU4 200 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 POT1Q9NUX5 634 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 IL1RAPL1Q9NZN1 696 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 ANAPC5Q9UJX4 755 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 LOXL2Q9Y4K0 774 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 CEP295Q9C0D2 2601 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 IGF2RP11717 2491 aa8.2□□□□□ -1.1
CTNNA1-231ENST00000521941 IGLV3-16A0A075B6K0 115 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 IGHV5-10-1A0A0J9YXX1 117 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 UBA6A0AVT1 1052 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 LILRA5A6NI73 299 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 SRRM3A6NNA2 597 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 GOLGA8KD6RF30 607 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 GOLGA8TH3BQL2 631 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 AP3B1O00203 1094 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 DNALI1O14645 258 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 PLD2O14939 933 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 UBXN7O94888 489 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 F7P08709 466 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 CCKBRP32239 447 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 ETV5P41161 510 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 NSG1P42857 185 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 GFERP55789 205 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 CDK16Q00536 496 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 CFHR1Q03591 330 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 C2orf54Q08AI8 447 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 PTK6Q13882 451 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 GPR18Q14330 331 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 ITIH4Q14624 930 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 C16orf72Q14CZ0 275 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 RPE65Q16518 533 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TBC1D25Q3MII6 688 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 SYTL3Q4VX76 610 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 AGAP9Q5VTM2 703 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 IZUMO3Q5VZ72 239 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 ABRAXAS1Q6UWZ7 409 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 ZNF574Q6ZN55 896 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TMEM26Q6ZUK4 368 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 NLRP9Q7RTR0 991 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 CREG2Q8IUH2 290 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 AVL9Q8NBF6 648 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 ELMO1Q92556 727 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 RSC1A1Q92681 617 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 RNF31Q96EP0 1072 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 RMDN2Q96LZ7 410 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 C16orf45Q96MC5 204 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 SERPINB12Q96P63 405 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TGM7Q96PF1 710 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 INSM2Q96T92 566 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TTC1Q99614 292 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 C19orf43Q9BQ61 176 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TRIM51Q9BSJ1 452 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 CCM2Q9BSQ5 444 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TRIM31Q9BZY9 425 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 VPS37BQ9H9H4 285 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 AKAP7Q9P0M2 348 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 MARCH4Q9P2E8 410 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 TSR3Q9UJK0 312 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 MAD1L1Q9Y6D9 718 aa8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 DNMT3AQ9Y6K1 912 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-231ENST00000521941 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 IQCF5A8MTL0 148 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 TMX2-CTNND1H3BSU7 103 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 IFRD1O00458 451 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CD3EAPO15446 510 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 TTI1O43156 1089 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 KCNJ13O60928 360 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 NDUFS3O75489 264 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 BANF1O75531 89 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 RASSF9O75901 435 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 VAPBO95292 243 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 FTH1P02794 183 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CAPNS1P04632 268 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 OR56A5P0C7T3 313 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 THRAP10827 490 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 MTHFD1P11586 935 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CCL4P13236 92 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 XRCC1P18887 633 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 PDHA2P29803 388 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CSTF2P33240 577 aaKnown RBP eCLIP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 MAGEA6P43360 314 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 ARCN1P48444 511 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 LSSP48449 732 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 SEPHS1P49903 392 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 LIMK2P53671 638 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 EPHA4P54764 986 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 EIF3BP55884 814 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 MRPS25P82663 173 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 DR1Q01658 176 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms