RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NEK2P51955 445 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PHKG1Q16816 387 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PLA2G4EQ3MJ16 856 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PGM2L1Q6PCE3 622 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 TPRG1Q6ZUI0 275 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 NUDT8Q8WV74 236 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 FAM83DQ9H4H8 585 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PARVBQ9HBI1 364 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 ZNF490Q9ULM2 529 aaPredicted RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 STK16O75716 305 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PGM3O95394 542 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 MTHFD1P11586 935 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 CCR2P41597 374 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 WASP42768 502 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 POLR2JP52435 117 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 ACVR1Q04771 509 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 ZNF423Q2M1K9 1284 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 ZFP1Q6P2D0 407 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CRTC1Q6UUV9 634 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 LARP4Q71RC2 724 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLK4-206ENST00000520878 GOLGA7Q7Z5G4 137 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 KLHDC8BQ8IXV7 354 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 NXPE1Q8N323 547 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CPSF7Q8N684 471 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 FIBINQ8TAL6 211 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 TSSK3Q96PN8 268 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 TTC34A8MYJ7 566 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PCNAP12004 261 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 HLA-EP13747 358 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CKMT2P17540 419 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PSMA4P25789 261 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 NSG1P42857 185 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 ERVPABLB-1P60509 514 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 FNDC3BQ53EP0 1204 aaKnown RBP11.19□□□□□ -0.62
CLK4-206ENST00000520878 PIGGQ5H8A4 983 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 C6orf52Q5T4I8 152 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CACHD1Q5VU97 1274 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 ZNF783Q6ZMS7 281 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CANT1Q8WVQ1 401 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 TMEM159Q96B96 161 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 MIEF2Q96C03 454 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 EID2BQ96D98 161 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 VPS50Q96JG6 964 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 NUDT4Q9NZJ9 180 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 PCTPQ9UKL6 214 aa11.19□□□□□ -0.62
CLK4-206ENST00000520878 LAMA3Q16787 3333 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 VIPR2P41587 438 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 STARD3Q14849 445 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 HERC3Q15034 1050 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 TCEA2Q15560 299 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 OTUD3Q5T2D3 398 aaPredicted RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 LETMD1Q6P1Q0 360 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 FBXL19Q6PCT2 694 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 GDPD4Q6W3E5 623 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 TRAPPC5Q8IUR0 188 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 MCOLN3Q8TDD5 553 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 FIG4Q92562 907 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 RNF145Q96MT1 663 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 CAAP1Q9H8G2 361 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 POPDC3Q9HBV1 291 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 RNF11Q9Y3C5 154 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 FBP2O00757 339 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 VPS4BO75351 444 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 LEFTY1O75610 366 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 KRT6AP02538 564 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 KRT6BP04259 564 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 GSNP06396 782 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 G6PDP11413 515 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 CAPN3P20807 821 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 RFC2P35250 354 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 KRT6CP48668 564 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 HK3P52790 923 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 PDK3Q15120 406 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 DOK6Q6PKX4 331 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 HEPHQ9BQS7 1158 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 SH3BP5O60239 455 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 LYNP07948 512 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 ELFN1P0C7U0 828 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 ETV3P41162 512 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 FPGSQ05932 587 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 ILF2Q12905 390 aaKnown RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 SETMARQ53H47 684 aaPredicted RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 C6orf136Q5SQH8 315 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 SLC2A7Q6PXP3 512 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 HTR3DQ70Z44 454 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 C2orf73Q8N5S3 287 aaPredicted RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 TRIML2Q8N7C3 387 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 RIOK2Q9BVS4 552 aaKnown RBP11.18□□□□□ -0.62
CLK4-206ENST00000520878 TUBB1Q9H4B7 451 aa11.18□□□□□ -0.62
CLK4-206ENST00000520878 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms