RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 MSH2P43246 934 aa15.07■□□□□ 0
LSM1-203ENST00000520755 PRLHRP49683 370 aa15.07■□□□□ 0
LSM1-203ENST00000520755 DEFB133Q30KQ1 61 aa15.07■□□□□ 0
LSM1-203ENST00000520755 PLA2G4EQ3MJ16 856 aa15.07■□□□□ 0
LSM1-203ENST00000520755 ZNF658BQ4V348 819 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 GRTP1Q5TC63 336 aa15.07■□□□□ 0
LSM1-203ENST00000520755 LRIG3Q6UXM1 1119 aa15.07■□□□□ 0
LSM1-203ENST00000520755 CHST15Q7LFX5 561 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 KANSL1Q7Z3B3 1105 aa15.07■□□□□ 0
LSM1-203ENST00000520755 TAF8Q7Z7C8 310 aa15.07■□□□□ 0
LSM1-203ENST00000520755 C11orf96Q7Z7L8 435 aa15.07■□□□□ 0
LSM1-203ENST00000520755 TDRPQ86YL5 185 aa15.07■□□□□ 0
LSM1-203ENST00000520755 TRAPPC5Q8IUR0 188 aa15.07■□□□□ 0
LSM1-203ENST00000520755 FSTL5Q8N475 847 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 EID2Q8N6I1 236 aa15.07■□□□□ 0
LSM1-203ENST00000520755 BEND7Q8N7W2 519 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 CCL4L1Q8NHW4 92 aa15.07■□□□□ 0
LSM1-203ENST00000520755 SGF29Q96ES7 293 aa15.07■□□□□ 0
LSM1-203ENST00000520755 OLFM1Q99784 485 aa15.07■□□□□ 0
LSM1-203ENST00000520755 PSMC3IPQ9P2W1 217 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 VPS9D1Q9Y2B5 631 aa15.07■□□□□ 0
LSM1-203ENST00000520755 BTBD3Q9Y2F9 522 aa15.07■□□□□ 0
LSM1-203ENST00000520755 GVINP1Q7Z2Y8 2422 aa15.07■□□□□ 0
LSM1-203ENST00000520755 FAM95CA0A1B0GW59 222 aa15.06■□□□□ 0
LSM1-203ENST00000520755 NEMP2A6NFY4 417 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CFAP99D6REC4 459 aa15.06■□□□□ 0
LSM1-203ENST00000520755 AGPSO00116 658 aa15.06■□□□□ 0
LSM1-203ENST00000520755 MAP2K7O14733 419 aa15.06■□□□□ 0
LSM1-203ENST00000520755 FLRT2O43155 660 aa15.06■□□□□ 0
LSM1-203ENST00000520755 SH3BP5O60239 455 aa15.06■□□□□ 0
LSM1-203ENST00000520755 ESR1P03372 595 aa15.06■□□□□ 0
LSM1-203ENST00000520755 ANXA6P08133 673 aa15.06■□□□□ 0
LSM1-203ENST00000520755 ACP5P13686 325 aa15.06■□□□□ 0
LSM1-203ENST00000520755 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
LSM1-203ENST00000520755 AK4P27144 223 aaPredicted RBP15.06■□□□□ 0
LSM1-203ENST00000520755 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
LSM1-203ENST00000520755 CSRP3P50461 194 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CDKN2DP55273 166 aa15.06■□□□□ 0
LSM1-203ENST00000520755 ILF3Q12906 894 aaKnown RBP eCLIP15.06■□□□□ 0
LSM1-203ENST00000520755 RASA2Q15283 850 aa15.06■□□□□ 0
LSM1-203ENST00000520755 RSPO4Q2I0M5 234 aaPredicted RBP15.06■□□□□ 0
LSM1-203ENST00000520755 INAVAQ3KP66 663 aa15.06■□□□□ 0
LSM1-203ENST00000520755 BCL7AQ4VC05 210 aa15.06■□□□□ 0
LSM1-203ENST00000520755 TMEM220Q6QAJ8 160 aa15.06■□□□□ 0
LSM1-203ENST00000520755 LRRTM4Q86VH4 590 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GKN2Q86XP6 184 aa15.06■□□□□ 0
LSM1-203ENST00000520755 NAXDQ8IW45 347 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CYP4X1Q8N118 509 aa15.06■□□□□ 0
LSM1-203ENST00000520755 KRT222Q8N1A0 295 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GIMAP7Q8NHV1 300 aa15.06■□□□□ 0
LSM1-203ENST00000520755 RHBDD1Q8TEB9 315 aa15.06■□□□□ 0
LSM1-203ENST00000520755 HEXDCQ8WVB3 486 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CAMK1GQ96NX5 476 aa15.06■□□□□ 0
LSM1-203ENST00000520755 TTC1Q99614 292 aa15.06■□□□□ 0
LSM1-203ENST00000520755 SLC30A3Q99726 388 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GSDMCQ9BYG8 508 aa15.06■□□□□ 0
LSM1-203ENST00000520755 PPCSQ9HAB8 311 aa15.06■□□□□ 0
LSM1-203ENST00000520755 TRNAU1APQ9NX07 287 aaKnown RBP15.06■□□□□ 0
LSM1-203ENST00000520755 TXNDC16Q9P2K2 825 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GALPQ9UBC7 116 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GULP1Q9UBP9 304 aa15.06■□□□□ 0
LSM1-203ENST00000520755 LGALS13Q9UHV8 139 aa15.06■□□□□ 0
LSM1-203ENST00000520755 GNPTGQ9UJJ9 305 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CORO1CQ9ULV4 474 aaPredicted RBP15.06■□□□□ 0
LSM1-203ENST00000520755 PCDHB1Q9Y5F3 818 aa15.06■□□□□ 0
LSM1-203ENST00000520755 CSNK1G3Q9Y6M4 447 aa15.06■□□□□ 0
LSM1-203ENST00000520755 PTPRZ1P23471 2315 aaPredicted RBP15.06■□□□□ 0
LSM1-203ENST00000520755 DMXL1Q9Y485 3027 aa15.06■□□□□ 0
LSM1-203ENST00000520755 FOXO6A8MYZ6 492 aa15.05■□□□□ -0
LSM1-203ENST00000520755 LMO7DNF2Z398 122 aa15.05■□□□□ -0
LSM1-203ENST00000520755 RASGRF2O14827 1237 aa15.05■□□□□ -0
LSM1-203ENST00000520755 SLC30A4O14863 429 aa15.05■□□□□ -0
LSM1-203ENST00000520755 KMOO15229 486 aa15.05■□□□□ -0
LSM1-203ENST00000520755 YY2O15391 372 aa15.05■□□□□ -0
LSM1-203ENST00000520755 AP2A2O94973 939 aa15.05■□□□□ -0
LSM1-203ENST00000520755 WISP3O95389 354 aaPredicted RBP15.05■□□□□ -0
LSM1-203ENST00000520755 FDXRP22570 491 aa15.05■□□□□ -0
LSM1-203ENST00000520755 PBLDP30039 288 aaPredicted RBP15.05■□□□□ -0
LSM1-203ENST00000520755 SPRP35270 261 aaPredicted RBP15.05■□□□□ -0
LSM1-203ENST00000520755 ACTR1BP42025 376 aa15.05■□□□□ -0
LSM1-203ENST00000520755 GRK6P43250 576 aa15.05■□□□□ -0
LSM1-203ENST00000520755 ACTR1AP61163 376 aa15.05■□□□□ -0
LSM1-203ENST00000520755 CTBSQ01459 385 aa15.05■□□□□ -0
LSM1-203ENST00000520755 IFFO1Q0D2I5 559 aa15.05■□□□□ -0
LSM1-203ENST00000520755 TMED2Q15363 201 aa15.05■□□□□ -0
LSM1-203ENST00000520755 INSCQ1MX18 579 aa15.05■□□□□ -0
LSM1-203ENST00000520755 HECTD2Q5U5R9 776 aa15.05■□□□□ -0
LSM1-203ENST00000520755 SLC30A9Q6PML9 568 aa15.05■□□□□ -0
LSM1-203ENST00000520755 HDXQ7Z353 690 aa15.05■□□□□ -0
LSM1-203ENST00000520755 PIM3Q86V86 326 aa15.05■□□□□ -0
LSM1-203ENST00000520755 GPATCH11Q8N954 259 aa15.05■□□□□ -0
LSM1-203ENST00000520755 GPBAR1Q8TDU6 330 aa15.05■□□□□ -0
LSM1-203ENST00000520755 ISL2Q96A47 359 aa15.05■□□□□ -0
LSM1-203ENST00000520755 CCDC77Q9BR77 488 aa15.05■□□□□ -0
LSM1-203ENST00000520755 VIPAS39Q9H9C1 493 aa15.05■□□□□ -0
LSM1-203ENST00000520755 CAB39LQ9H9S4 337 aa15.05■□□□□ -0
LSM1-203ENST00000520755 TBK1Q9UHD2 729 aa15.05■□□□□ -0
LSM1-203ENST00000520755 KCNK6Q9Y257 313 aa15.05■□□□□ -0
LSM1-203ENST00000520755 ST14Q9Y5Y6 855 aa15.05■□□□□ -0
LSM1-203ENST00000520755 ANKRD12Q6UB98 2062 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms