RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MOSPD2Q8NHP6 518 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ARRDC2Q8TBH0 407 aa4□□□□□ -1.77
SQLE-204ENST00000520493 GPT2Q8TD30 523 aa4□□□□□ -1.77
SQLE-204ENST00000520493 MGARPQ8TDB4 240 aa4□□□□□ -1.77
SQLE-204ENST00000520493 GRK7Q8WTQ7 553 aa4□□□□□ -1.77
SQLE-204ENST00000520493 TMED6Q8WW62 240 aa4□□□□□ -1.77
SQLE-204ENST00000520493 DNASE2BQ8WZ79 361 aa4□□□□□ -1.77
SQLE-204ENST00000520493 MRPS27Q92552 414 aaKnown RBP4□□□□□ -1.77
SQLE-204ENST00000520493 LPGAT1Q92604 370 aa4□□□□□ -1.77
SQLE-204ENST00000520493 SNX21Q969T3 373 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ERGIC1Q969X5 290 aa4□□□□□ -1.77
SQLE-204ENST00000520493 NEK1Q96PY6 1258 aa4□□□□□ -1.77
SQLE-204ENST00000520493 NUP85Q9BW27 656 aa4□□□□□ -1.77
SQLE-204ENST00000520493 FUT8Q9BYC5 575 aa4□□□□□ -1.77
SQLE-204ENST00000520493 OR6C3Q9NZP0 311 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SLC16A5O15375 505 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SPINT2O43291 252 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SLC22A3O75751 556 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 RSL1D1O76021 490 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 CAMTA2O94983 1202 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 ZBTB11O95625 1053 aaPredicted RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 IGKV3-20P01619 116 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 MT-ND3P03897 115 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 VPREB1P12018 145 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GJA1P17302 382 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 TCEA1P23193 301 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 CCR10P46092 362 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 NPY4RP50391 375 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 BPIFB3P59826 476 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 CSNK2A1P68400 391 aaPredicted RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 SPOCK1Q08629 439 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 COASYQ13057 564 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GAGE2BQ13066 116 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 TUBB2AQ13885 445 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 MVPQ14764 893 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 TNIP1Q15025 636 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SNAPC1Q16533 368 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 ZNF674Q2M3X9 581 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 KIF19Q2TAC6 998 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GAGE2EQ4V326 116 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 MPP7Q5T2T1 576 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 HIST2H2BCQ6DN03 193 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 HIST2H2BDQ6DRA6 164 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GAGE2AQ6NT46 116 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SHQ1Q6PI26 577 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 KCTD18Q6PI47 426 aaPredicted RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 INTS8Q75QN2 995 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 C16orf82Q7Z2V1 217 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 CAMKMTQ7Z624 323 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 ADCK2Q7Z695 626 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 LDB1Q86U70 411 aaPredicted RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 AACSQ86V21 672 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SPC24Q8NBT2 197 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SLC38A9Q8NBW4 561 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 WFIKKN2Q8TEU8 576 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 DNAAF4Q8WXU2 420 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 APBB2Q92870 758 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 TAAR8Q969N4 342 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 TXNDC15Q96J42 360 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 CCDC114Q96M63 670 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 SMC6Q96SB8 1091 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 CDRT15Q96T59 188 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 EGFL8Q99944 293 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 MLPHQ9BV36 600 aaPredicted RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 TUBB2BQ9BVA1 445 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GPR88Q9GZN0 384 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 LARSQ9P2J5 1176 aaKnown RBP3.99□□□□□ -1.77
SQLE-204ENST00000520493 EPS15L1Q9UBC2 864 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 DNAJB9Q9UBS3 223 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 GAGE2DQ9UEU5 116 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 STK39Q9UEW8 545 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 TSPYL4Q9UJ04 414 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 HACL1Q9UJ83 578 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 POMT1Q9Y6A1 747 aa3.99□□□□□ -1.77
SQLE-204ENST00000520493 ASTN2O75129 1339 aaPredicted RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 A0A087WV48 116 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 EIF4E1BA6NMX2 242 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 H0YAE9 185 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 H0YIN7 160 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 KCNN4O15554 427 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 HSPA12AO43301 675 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 PLRG1O43660 514 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 PRAMEF11O60813 436 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE7O76087 117 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ZNF432O94892 652 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 CYC1P08574 325 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 LINGO3P0C6S8 592 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE12FP0CL80 117 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE12GP0CL81 117 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE12IP0CL82 117 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 HLA-DPA1P20036 260 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 UGT1A1P22309 533 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 MC5RP33032 325 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 PDLIM4P50479 330 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 PEX5P50542 639 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 BMXP51813 675 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms