RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CRTC3Q6UUV7 619 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 UNQ6494/PRO21346Q6UXR6 183 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 FAM83HQ6ZRV2 1179 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-212ENST00000519661 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 MAATS1Q7Z4T9 603 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 OR4D9Q8NGE8 314 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 CARD6Q9BX69 1037 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 PLAC1Q9HBJ0 212 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 PRDM8Q9NQV8 689 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 CATSPERZQ9NTU4 200 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 SIRPGQ9P1W8 387 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 MARCH4Q9P2E8 410 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-212ENST00000519661 KLHL42Q9P2K6 505 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 ACSL6Q9UKU0 697 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 WDR37Q9Y2I8 494 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 ENTPD2Q9Y5L3 495 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 FAM169AQ9Y6X4 670 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 A0A1W2PNU3 283 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 SLC5A10A0PJK1 596 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 OR51F1A6NGY5 319 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 OR2AG2A6NM03 316 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 PRMT5O14744 637 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 HGSO14964 777 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 TOX3O15405 576 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 TTI1O43156 1089 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 GPC4O75487 556 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 C9P02748 559 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 FTH1P02794 183 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 RPLP0P05388 317 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 ANKRD34CP0C6C1 535 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 PRSS56P0CW18 603 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 JUPP14923 745 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 PAMP19021 973 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CCL7P80098 99 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CFHR1Q03591 330 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 SPIDRQ14159 915 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 NFE2L1Q14494 772 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 GBX1Q14549 363 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CLCA4Q14CN2 919 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 DUPD1Q68J44 220 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 MRNIPQ6NTE8 343 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CILP2Q8IUL8 1156 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CARFQ8N187 725 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CLDN19Q8N6F1 224 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 BBOF1Q8ND07 529 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 LPGAT1Q92604 370 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 NXPE2Q96DL1 559 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 SNF8Q96H20 258 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 PRR11Q96HE9 360 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 TMEM74Q96NL1 305 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 BIRC8Q96P09 236 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 GFM1Q96RP9 751 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 ERP44Q9BS26 406 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 STN1Q9H668 368 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 COG4Q9H9E3 785 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 INTS10Q9NVR2 710 aaKnown RBP11.29□□□□□ -0.6
SPIDR-212ENST00000519661 WHRNQ9P202 907 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 ASIC3Q9UHC3 531 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 CDYLQ9Y232 598 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 TEX264Q9Y6I9 313 aa11.29□□□□□ -0.6
SPIDR-212ENST00000519661 ACACAQ13085 2346 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 CSO75390 466 aaKnown RBP11.28□□□□□ -0.6
SPIDR-212ENST00000519661 SLCO2B1O94956 709 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 VAPBO95292 243 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 ESR1P03372 595 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 OR56A5P0C7T3 313 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 THRAP10827 490 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
SPIDR-212ENST00000519661 PGAM1P18669 254 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 SPINK2P20155 84 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 CD9P21926 228 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 ACADLP28330 430 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 NDUFS1P28331 727 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 ATP5DP30049 168 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 CSF2RBP32927 897 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 HALP42357 657 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 LIMK2P53671 638 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 RPE65Q16518 533 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 DNAJC21Q5F1R6 531 aaKnown RBP11.28□□□□□ -0.6
SPIDR-212ENST00000519661 IZUMO3Q5VZ72 239 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 ZNF574Q6ZN55 896 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-212ENST00000519661 CYS1Q717R9 158 aa11.28□□□□□ -0.6
SPIDR-212ENST00000519661 TMPRSS9Q7Z410 1059 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms