RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 WIPF3A6NGB9 483 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 SMTNL1A8MU46 457 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 MEN1O00255 615 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 ZNF185O15231 689 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 CLDN1O95832 211 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 MT-CYBP00156 380 aaPredicted RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 SERPING1P05155 500 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 MTHFD1P11586 935 aaKnown RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 KDELR1P24390 212 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 DCTP40126 519 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 VAV2P52735 878 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 RRADP55042 308 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 TYRO3Q06418 890 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 NFE2L1Q14494 772 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 LDLRAP1Q5SW96 308 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 ZDHHC20Q5W0Z9 365 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 ARMC6Q6NXE6 501 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 TMEM220Q6QAJ8 160 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 FAM83HQ6ZRV2 1179 aaPredicted RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 DSELQ8IZU8 1212 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 PLD5Q8N7P1 536 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 RBMXL3Q8N7X1 1067 aaKnown RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 RASGEF1AQ8N9B8 481 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 SPATA22Q8NHS9 363 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 DTX3LQ8TDB6 740 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 RAPGEF5Q92565 580 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 SYN2Q92777 582 aaPredicted RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 BPIFA3Q9BQP9 254 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 FANCEQ9HB96 536 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 SOHLH2Q9NX45 425 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 GPR83Q9NYM4 423 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 CTTNBP2NLQ9P2B4 639 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 ERRFI1Q9UJM3 462 aaPredicted RBP15.37■□□□□ 0.05
LMNA-223ENST00000515459 BTRCQ9Y297 605 aa15.37■□□□□ 0.05
LMNA-223ENST00000515459 A6NL46 340 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 OR2AG2A6NM03 316 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 PMPCBO75439 489 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 CTSCP53634 463 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 NR1I3Q14994 352 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 PDK1Q15118 436 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 PLEKHS1Q5SXH7 462 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 METRNLQ641Q3 311 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 LCN10Q6JVE6 187 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 GLIS1Q8NBF1 620 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 ZFPM2Q8WW38 1151 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 CLIP3Q96DZ5 547 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 TCTN2Q96GX1 697 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 SMAD5Q99717 465 aaKnown RBP15.36■□□□□ 0.05
LMNA-223ENST00000515459 TRABDQ9H4I3 376 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 IL26Q9NPH9 171 aa15.36■□□□□ 0.05
LMNA-223ENST00000515459 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
LMNA-223ENST00000515459 CFAP20Q9Y6A4 193 aaKnown RBP15.36■□□□□ 0.05
LMNA-223ENST00000515459 DOPEY1Q5JWR5 2465 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 A0A1W2PQJ5 194 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 LRRD1A4D1F6 860 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 OR6C74A6NCV1 312 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 APOL1O14791 398 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 PPP1R12AO14974 1030 aaPredicted RBP15.35■□□□□ 0.05
LMNA-223ENST00000515459 LDLRP01130 860 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 SPAM1P38567 509 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 KPNA2P52292 529 aaKnown RBP15.35■□□□□ 0.05
LMNA-223ENST00000515459 ITGA1P56199 1179 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 NR6A1Q15406 480 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 PPP2R5EQ16537 467 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 PRAMEF17Q5VTA0 474 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 FAM69BQ5VUD6 431 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 IQCKQ8N0W5 287 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 BEND7Q8N7W2 519 aaPredicted RBP15.35■□□□□ 0.05
LMNA-223ENST00000515459 DDHD1Q8NEL9 900 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 C19orf60Q96EN9 201 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 INSM2Q96T92 566 aaPredicted RBP15.35■□□□□ 0.05
LMNA-223ENST00000515459 TLR10Q9BXR5 811 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 GLOD4Q9HC38 313 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 C5AR2Q9P296 337 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 UVRAGQ9P2Y5 699 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 SLC24A2Q9UI40 661 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 LCMT1Q9UIC8 334 aa15.35■□□□□ 0.05
LMNA-223ENST00000515459 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
LMNA-223ENST00000515459 GLYATL1P3A0A0U1RQE8 302 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 ZNF487B1APH4 448 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 GPR39O43194 453 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 KRT86O43790 486 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 UGT1A9O60656 530 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 CBX6O95503 412 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 SERPINC1P01008 464 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 CAPN1P07384 714 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 UGT1A6P19224 532 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 UGT1A1P22309 533 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 UGT1A4P22310 534 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 PBLDP30039 288 aaPredicted RBP15.34■□□□□ 0.05
LMNA-223ENST00000515459 RORAP35398 523 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 ABRQ12979 859 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 PRKAA1Q13131 559 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 ITGA9Q13797 1035 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 TEX44Q53QW1 395 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 FNBP1LQ5T0N5 605 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 GPRC6AQ5T6X5 926 aa15.34■□□□□ 0.05
LMNA-223ENST00000515459 SLC9A4Q6AI14 798 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms