RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 WDR37Q9Y2I8 494 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 OR52A4PA6NMU1 304 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 F8W8V4 182 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 TOX3O15405 576 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 PHF2O75151 1096 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 C9P02748 559 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ABCG1P45844 678 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 SARNPP82979 210 aaKnown RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 RPA4Q13156 261 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 KCNJ11Q14654 390 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 CLCA4Q14CN2 919 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 DBN1Q16643 649 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF658BQ4V348 819 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 CCDC38Q502W7 563 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 TTC27Q6P3X3 843 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 LRRC8BQ6P9F7 803 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 CCDC137Q6PK04 289 aaKnown RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 FAM83HQ6ZRV2 1179 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 DET1Q7L5Y6 550 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ARHGAP22Q7Z5H3 698 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF761Q86XN6 746 aaPredicted RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 PIANPQ8IYJ0 282 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 MS4A14Q96JA4 679 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 RAB33BQ9H082 229 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
CLCN3-210ENST00000515420 MRM3Q9HC36 420 aaKnown RBP12.52□□□□□ -0.41
CLCN3-210ENST00000515420 CCDC162PA2VCL2 907 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 PMS2P1A4D2B8 440 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 KRT37O76014 449 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 UBXN7O94888 489 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 KRT14P02533 472 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 SLC35G4P0C7Q5 338 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 MTHFD1P11586 935 aaKnown RBP12.51□□□□□ -0.41
CLCN3-210ENST00000515420 CD82P27701 267 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 NDUFS1P28331 727 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
CLCN3-210ENST00000515420 CSTF2P33240 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLCN3-210ENST00000515420 CAPZBP47756 277 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 CDKN1CP49918 316 aaPredicted RBP12.51□□□□□ -0.41
CLCN3-210ENST00000515420 PRAMEP78395 509 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 GPS1Q13098 491 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 GPR18Q14330 331 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 RPE65Q16518 533 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 KLHL35Q6PF15 583 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 FOXR1Q6PIV2 292 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 MPP5Q8N3R9 675 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 KCNE4Q8WWG9 221 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 NCSTNQ92542 709 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 HDAC10Q969S8 669 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 KIFC1Q9BW19 673 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 TBC1D10AQ9BXI6 508 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 AP1M1Q9BXS5 423 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 FAM96AQ9H5X1 160 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 EPHA6Q9UF33 1036 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 PISDQ9UG56 409 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 HEBP2Q9Y5Z4 205 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 PTPRQQ9UMZ3 2332 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
CLCN3-210ENST00000515420 CCDC78A2IDD5 438 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 B4E171 279 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 LIN7AO14910 233 aaPredicted RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 GOT2P00505 430 aaKnown RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 FTH1P02794 183 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 MLNP12872 115 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 SLC5A2P31639 672 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 TSPAN7P41732 249 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 CD151P48509 253 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 PPM1FP49593 454 aaPredicted RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 UCNP55089 124 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 RAB15P59190 212 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 GSE1Q14687 1217 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 FASTKD1Q53R41 847 aaKnown RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 PAPD7Q5XG87 772 aaKnown RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
CLCN3-210ENST00000515420 ZNF534Q76KX8 674 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 RCBTB1Q8NDN9 531 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 MCUQ8NE86 351 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 C12orf66Q96MD2 445 aa12.5□□□□□ -0.41
CLCN3-210ENST00000515420 KIR3DX1Q9H7L2 352 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms