RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 OR2AG1Q9H205 316 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 RMI1Q9H9A7 625 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 LTB4R2Q9NPC1 389 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 THEGQ9P2T0 379 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 RAP2CQ9Y3L5 183 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TCF20Q9UGU0 1960 aaKnown RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 OR2AG2A6NM03 316 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 A8MT66 165 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 STX16-NPEPL1H3BU86 382 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 STX16O14662 325 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 LIN7AO14910 233 aaPredicted RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 KCNJ13O60928 360 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ZNF217O75362 1048 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 MTX2O75431 263 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 SLCO2B1O94956 709 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 PCCBP05166 539 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 HOXC4P09017 264 aaPredicted RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 ENO2P09104 434 aaPredicted RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 NUDT1P36639 197 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ARFIP2P53365 341 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ALDH18A1P54886 795 aaKnown RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 HERVK_113P63132 956 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 GALNT1Q10472 559 aaPredicted RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 INPP5AQ14642 412 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ZSCAN26Q16670 478 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 PFKFB4Q16877 469 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 SYTL3Q4VX76 610 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 SEL1L3Q68CR1 1132 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 FAM124AQ86V42 546 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 TRIM69Q86WT6 500 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ZNF687Q8N1G0 1237 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 TSTD1Q8NFU3 115 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 MCOLN3Q8TDD5 553 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 HMGB4Q8WW32 186 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 PHF21BQ96EK2 531 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 FAR2Q96K12 515 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 LINC00615Q96LM1 132 aaPredicted RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 FOPNLQ96NB1 174 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ERVK-6Q9BXR3 956 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 WDR26Q9H7D7 661 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 RDH14Q9HBH5 336 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 KCNK4Q9NYG8 393 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 NUDT4Q9NZJ9 180 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ATXN10Q9UBB4 475 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 VTI1BQ9UEU0 232 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 ZFR2Q9UPR6 939 aaKnown RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 APOBEC2Q9Y235 224 aaKnown RBP15.73■□□□□ 0.11
NUP54-214ENST00000514307 USH1CQ9Y6N9 552 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 VCANP13611 3396 aa15.73■□□□□ 0.11
NUP54-214ENST00000514307 MUC22E2RYF6 1773 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 BRWD1Q9NSI6 2320 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 NPEPPSL1A6NEC2 478 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 PRR23AA6NEV1 266 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 K7ESM1 405 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 FPGTO14772 594 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 KLK8O60259 260 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 GPC4O75487 556 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 POP7O75817 140 aaKnown RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 SUPT7LO94864 414 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 SOD1P00441 154 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 IGLV3-19P01714 112 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 VCLP18206 1134 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 GBX1Q14549 363 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 ARL13AQ5H913 290 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 ZNF648Q5T619 568 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 ANKS6Q68DC2 871 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 METTL2BQ6P1Q9 378 aaKnown RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 HEATR4Q86WZ0 1026 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 SIX5Q8N196 739 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 PTGR2Q8N8N7 351 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 TP53I13Q8NBR0 393 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 PLA2G15Q8NCC3 412 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 DENND6BQ8NEG7 585 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 LKAAEAR1Q8TD35 194 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 SKA2Q8WVK7 121 aaPredicted RBP15.72■□□□□ 0.11
NUP54-214ENST00000514307 CYP4F12Q9HCS2 524 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 NPHS2Q9NP85 383 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 DNAJC16Q9Y2G8 782 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 OARD1Q9Y530 152 aa15.72■□□□□ 0.11
NUP54-214ENST00000514307 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 MYLKQ15746 1914 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 TICRRQ7Z2Z1 1910 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 KRBA1A5PL33 1030 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 MGAT4DA6NG13 374 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 UBXN8O00124 270 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 CACNB4O00305 520 aaPredicted RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 TOR1BO14657 336 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 KMOO15229 486 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 ITM2AO43736 263 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 SGTAO43765 313 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 DCTN3O75935 186 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 MTHFD2P13995 350 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 CYP2A7P20853 494 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 KELP23276 732 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 MAP4P27816 1152 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 RPL14P50914 215 aaKnown RBP15.71■□□□□ 0.11
NUP54-214ENST00000514307 CCR5P51681 352 aa15.71■□□□□ 0.11
NUP54-214ENST00000514307 CDK3Q00526 305 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms