RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 GLYATL1Q969I3 302 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF501Q96CX3 271 aaPredicted RBP13.61□□□□□ -0.23
SPCS3-204ENST00000513139 IQCDQ96DY2 449 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 MAP3K3Q99759 626 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 SYT11Q9BT88 431 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
SPCS3-204ENST00000513139 TRIM7Q9C029 511 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 ARFGAP3Q9NP61 516 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 TAS2R14Q9NYV8 317 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 MYO7BQ6PIF6 2116 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 PKDREJQ9NTG1 2253 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 PCSK5Q92824 1860 aa13.61□□□□□ -0.23
SPCS3-204ENST00000513139 NF1P21359 2839 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 MEN1O00255 615 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 KCNJ13O60928 360 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 ZBTB11O95625 1053 aaPredicted RBP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 IL4RP24394 825 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 IL1R2P27930 398 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 GRNP28799 593 aaKnown RBP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 HALP42357 657 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 QPCTQ16769 361 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 DNTTIP2Q5QJE6 756 aaKnown RBP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 PLEKHS1Q5SXH7 462 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 DSELQ8IZU8 1212 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 TRAM1L1Q8N609 369 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 ZBTB2Q8N680 514 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 SPC24Q8NBT2 197 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 EID2BQ96D98 161 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 IP6K3Q96PC2 410 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 ADGRE3Q9BY15 652 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 HAUS4Q9H6D7 363 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 RUBCNLQ9H714 662 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 ZFYVE1Q9HBF4 777 aa13.6□□□□□ -0.23
SPCS3-204ENST00000513139 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 RBM22Q9NW64 420 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 COPG1Q9Y678 874 aaKnown RBP13.6□□□□□ -0.23
SPCS3-204ENST00000513139 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 HEATR9A2RTY3 570 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 CDK14O94921 469 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 ALPPP05187 535 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 CAPN1P07384 714 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 TPM1P09493 284 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 CCNCP24863 283 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 PRSS12P56730 875 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 CDK18Q07002 472 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 KLHL30Q0D2K2 578 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 TRIM14Q14142 442 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 LYPLAL1Q5VWZ2 237 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 CERS6Q6ZMG9 384 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 C11orf96Q7Z7L8 435 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 UBE2Q2Q8WVN8 375 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 TEKT4Q8WW24 435 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 HSPH1Q92598 858 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 TSGA13Q96PP4 275 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 KCNK17Q96T54 332 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 DNAJC7Q99615 494 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 ILKAPQ9H0C8 392 aaPredicted RBP13.59□□□□□ -0.23
SPCS3-204ENST00000513139 AGPAT4Q9NRZ5 378 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 DTLQ9NZJ0 730 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 WDR37Q9Y2I8 494 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 SCINQ9Y6U3 715 aa13.59□□□□□ -0.23
SPCS3-204ENST00000513139 MTORP42345 2549 aa13.58□□□□□ -0.23
SPCS3-204ENST00000513139 AKAP9Q99996 3911 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 OR5K3A6NET4 321 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 TMCO5BA8MYB1 307 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 MFAP3LO75121 409 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
SPCS3-204ENST00000513139 RARAP10276 462 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 GZMAP12544 262 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 RORAP35398 523 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 PRKCIP41743 596 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 NIPAL4Q0D2K0 466 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 GALNT2Q10471 571 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 ATP1A4Q13733 1029 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 MYBPC3Q14896 1274 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 ZRSR2Q15696 482 aaKnown RBP13.58□□□□□ -0.24
SPCS3-204ENST00000513139 GPR19Q15760 415 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
SPCS3-204ENST00000513139 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 RAB43Q86YS6 212 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 TC2NQ8N9U0 490 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 DPH2Q9BQC3 489 aaPredicted RBP13.58□□□□□ -0.24
SPCS3-204ENST00000513139 SYTL2Q9HCH5 934 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.24
SPCS3-204ENST00000513139 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
SPCS3-204ENST00000513139 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms