RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DTLQ9NZJ0 730 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 CAPN11Q9UMQ6 739 aa8.9□□□□□ -0.98
NUP54-211ENST00000512151 ANKRD12Q6UB98 2062 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 C2CD4BA6NLJ0 364 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 LRRC53A6NM62 1247 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 F8VZ95 297 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 NUAK1O60285 661 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 CNOT3O75175 753 aaKnown RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 TPM3P06753 285 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 ZNF8P17098 575 aaPredicted RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 MST1P26927 711 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 RPL10P27635 214 aaKnown RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 CDC25BP30305 580 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 HSD11B2P80365 405 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 SSPNQ14714 243 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 ZFYVE27Q5T4F4 411 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 MEX3BQ6ZN04 569 aaKnown RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 TAOK1Q7L7X3 1001 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 CXXC5Q7LFL8 322 aaKnown RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 NLRP8Q86W28 1048 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 TMEM35BQ8NCS4 154 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 OR1L3Q8NH93 324 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 ADAMTS18Q8TE60 1221 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 FAM172AQ8WUF8 416 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 CPT1BQ92523 772 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 NR4A3Q92570 626 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 NTAN1Q96AB6 310 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 CLIP3Q96DZ5 547 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 AGAP3Q96P47 875 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 TRIM56Q9BRZ2 755 aaKnown RBP8.89□□□□□ -0.99
NUP54-211ENST00000512151 NOD2Q9HC29 1040 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 POT1Q9NUX5 634 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 ATXN10Q9UBB4 475 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 PPIL1Q9Y3C6 166 aa8.89□□□□□ -0.99
NUP54-211ENST00000512151 NUP210LQ5VU65 1888 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.88□□□□□ -0.99
NUP54-211ENST00000512151 PDZK1P1A8MUH7 402 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 SOCS5O75159 536 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 GFPT2O94808 682 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 UNC5CO95185 931 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 PGLSO95336 258 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 CLDN14O95500 239 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 PDHA1P08559 390 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 SDC4P31431 198 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 SOX5P35711 763 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 ARL4DP49703 201 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 STC1P52823 247 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 DRG2P55039 364 aaKnown RBP8.88□□□□□ -0.99
NUP54-211ENST00000512151 SLC10A7Q0GE19 358 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 PRKD1Q15139 912 aaPredicted RBP8.88□□□□□ -0.99
NUP54-211ENST00000512151 TAF3Q5VWG9 929 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 TMEM198Q66K66 360 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 FCRL6Q6DN72 434 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 MTFR2Q6P444 385 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 CRTC3Q6UUV7 619 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 STRADAQ7RTN6 431 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 IRF2BP2Q7Z5L9 587 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 KMT5CQ86Y97 462 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 FAM71AQ8IYT1 594 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 NPWQ8N729 165 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 SPC24Q8NBT2 197 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 GPR150Q8NGU9 434 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 OR8K5Q8NH50 307 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 CPA5Q8WXQ8 436 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 FAM81BQ96LP2 452 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 IP6K3Q96PC2 410 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 PSKH2Q96QS6 385 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 FOXC2Q99958 501 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 TLR10Q9BXR5 811 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 RMI1Q9H9A7 625 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 ACTR5Q9H9F9 607 aaPredicted RBP8.88□□□□□ -0.99
NUP54-211ENST00000512151 ATP13A2Q9NQ11 1180 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 TNFRSF10DQ9UBN6 386 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 TRIM10Q9UDY6 481 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 DNAJC16Q9Y2G8 782 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 WDR37Q9Y2I8 494 aa8.88□□□□□ -0.99
NUP54-211ENST00000512151 PTRH2Q9Y3E5 179 aaKnown RBP8.88□□□□□ -0.99
NUP54-211ENST00000512151 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.88□□□□□ -0.99
NUP54-211ENST00000512151 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 TLCD2A6NGC4 264 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ARHGAP42A6NI28 874 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 PEX12O00623 359 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ZNF500O60304 480 aaPredicted RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 KLHL41O60662 606 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 MFAP3LO75121 409 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 UMODP07911 640 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 SKILP12757 684 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 CHRNB2P17787 502 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 AGAP20933 346 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 IL4RP24394 825 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 MSNP26038 577 aaKnown RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 HADHAP40939 763 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 PTPN9P43378 593 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 PPP2R2AP63151 447 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ZBED6P86452 979 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 TLR1Q15399 786 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 C3AR1Q16581 482 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 DNTTIP2Q5QJE6 756 aaKnown RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 NAA35Q5VZE5 725 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms