RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-209	ENST00000511009	SLC44A1	Q8WWI5	657 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	WASF1	Q92558	559 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	MR1	Q95460	341 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	SPSB1	Q96BD6	273 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	SFXN2	Q96NB2	322 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	OR1F2P	Q96R84	312 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	CRAMP1	Q96RY5	1269 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	SLC25A33	Q9BSK2	321 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	HHATL	Q9HCP6	504 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	ZBTB40	Q9NUA8	1239 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	HIF1AN	Q9NWT6	349 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	CPSF3	Q9UKF6	684 aa	Known RBP	4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	PADI3	Q9ULW8	664 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	GRIP1	Q9Y3R0	1128 aa		4.57	□□□□□ -1.68
MBD4-209	ENST00000511009	ASTN2	O75129	1339 aa	Predicted RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	INAFM1	C9JVW0	142 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	PSMD14	O00487	310 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	GBA	P04062	536 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	FBL	P22087	321 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	COG7	P83436	770 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	TUBB2A	Q13885	445 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	ZNF674	Q2M3X9	581 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	KLHL26	Q53HC5	615 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	IYD	Q6PHW0	289 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	RAPH1	Q70E73	1250 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	OR2AJ1	Q8NGZ0	328 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	CTCFL	Q8NI51	663 aa	Predicted RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	GRK7	Q8WTQ7	553 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	EXT2	Q93063	718 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	RPL36AL	Q969Q0	106 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	MTERF3	Q96E29	417 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	ERO1A	Q96HE7	468 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	CCDC43	Q96MW1	224 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	CSF3R	Q99062	836 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	TUBB2B	Q9BVA1	445 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	SF3B5	Q9BWJ5	86 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	DCLK3	Q9C098	648 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	SEMA6A	Q9H2E6	1030 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	PTGFRN	Q9P2B2	879 aa		4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	AGO1	Q9UL18	857 aa	Known RBP	4.56	□□□□□ -1.68
MBD4-209	ENST00000511009	PTPRC	P08575	1304 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009		A0A1W2PPM1	405 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	ENO4	A6NNW6	628 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	T	O15178	435 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE7	O76087	117 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	DDN	O94850	711 aa	Predicted RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SUPT20HL2	P0C7V6	817 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE12F	P0CL80	117 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE12G	P0CL81	117 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE12I	P0CL82	117 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	TNFRSF1B	P20333	461 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	CAST	P20810	708 aa	Known RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	AZGP1	P25311	298 aa	Known RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	LMO1	P25800	156 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SSTR2	P30874	369 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SLC9A3	P48764	834 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	DSC1	Q08554	894 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE1	Q13065	139 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GAGE4	Q13068	117 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SLC10A5	Q5PT55	438 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	GCNT6	Q5T4J0	391 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	FAM198B	Q6UWH4	519 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	OTOA	Q7RTW8	1153 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	TLK2	Q86UE8	772 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	FJX1	Q86VR8	437 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	HOOK3	Q86VS8	718 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	DZIP1	Q86YF9	867 aa	Known RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	CHERP	Q8IWX8	916 aa	Known RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	DNAJC10	Q8IXB1	793 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	CHCHD4	Q8N4Q1	142 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SLC22A12	Q96S37	553 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	INTS14	Q96SY0	518 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	C16orf70	Q9BSU1	422 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	KRTAP9-8	Q9BYQ0	159 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SPRTN	Q9H040	489 aa	Predicted RBP	4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	DPAGT1	Q9H3H5	408 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	PCDH9	Q9HC56	1237 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	SNX7	Q9UNH6	387 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	KCNK7	Q9Y2U2	307 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009	AMDHD2	Q9Y303	409 aa		4.55	□□□□□ -1.68
MBD4-209	ENST00000511009		A0A087WV48	116 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	OR2M5	A3KFT3	312 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	LINC01553	A4QN01	128 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	C15orf62	A8K5M9	175 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	HEPACAM2	A8MVW5	462 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009		H3BNX3	289 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CLDN4	O14493	209 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	SOCS2	O14508	198 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	CLIC2	O15247	247 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	BUD23	O43709	281 aa	Known RBP	4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	KCNJ13	O60928	360 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	RFPL2	O75678	378 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	TOMM70	O94826	608 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	GOSR1	O95249	250 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	MOCS3	O95396	460 aa		4.54	□□□□□ -1.68
MBD4-209	ENST00000511009	VIM	P08670	466 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms