RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ABRQ12979 859 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 MSLNQ13421 630 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 UGT8Q16880 541 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF789Q5FWF6 425 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 PLEKHS1Q5SXH7 462 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 METRNLQ641Q3 311 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 AMZ2Q86W34 360 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 VSIG1Q86XK7 387 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 RBM12BQ8IXT5 1001 aaKnown RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF567Q8N184 647 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 Q8NA96 180 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 DDHD1Q8NEL9 900 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 GDAP1Q8TB36 358 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 UBXN4Q92575 508 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF514Q96K75 400 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF830Q96NB3 372 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 WWP1Q9H0M0 922 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 CHST8Q9H2A9 424 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 GOLPH3Q9H4A6 298 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 MAP4K5Q9Y4K4 846 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 FER1L5A0AVI2 2057 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 CCDC88CQ9P219 2028 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 OR5K3A6NET4 321 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 ARGFXA6NJG6 315 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 C21orf140B9A014 251 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 MTHFD1P11586 935 aaKnown RBP15.53■□□□□ 0.08
RAB40C-202ENST00000509637 TNNT1P13805 278 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 PTGIRP43119 386 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 CCL11P51671 97 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 DET1Q7L5Y6 550 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 DAAM2Q86T65 1068 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 DTX3LQ8TDB6 740 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 DNAJC7Q99615 494 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 PDE7BQ9NP56 450 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 HAUS2Q9NVX0 235 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 HRASLS2Q9NWW9 162 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 LUZP4Q9P127 313 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 FAM153AQ9UHL3 310 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 FARSAQ9Y285 508 aaKnown RBP15.53■□□□□ 0.08
RAB40C-202ENST00000509637 CACNA1DQ01668 2161 aa15.53■□□□□ 0.08
RAB40C-202ENST00000509637 HIVEP3Q5T1R4 2406 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 OR6C74A6NCV1 312 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 AGTP01019 485 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 COMTP21964 271 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 SPAM1P38567 509 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 MARCKSL1P49006 195 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 SLC1A5Q15758 541 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 C4orf17Q53FE4 359 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 FNBP1LQ5T0N5 605 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 LRRC38Q5VT99 294 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 PAPD7Q5XG87 772 aaKnown RBP15.52■□□□□ 0.08
RAB40C-202ENST00000509637 BRSK1Q8TDC3 778 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 BLOC1S5Q8TDH9 187 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.52■□□□□ 0.08
RAB40C-202ENST00000509637 IMP3Q9NV31 184 aaKnown RBP15.52■□□□□ 0.08
RAB40C-202ENST00000509637 SLC24A2Q9UI40 661 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 ARL5AQ9Y689 179 aa15.52■□□□□ 0.08
RAB40C-202ENST00000509637 GLYATL1P3A0A0U1RQE8 302 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 TLCD2A6NGC4 264 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 TTLL8A6PVC2 850 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 PPP1R12AO14974 1030 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 CST8O60676 142 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 CEACAM4O75871 244 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 EPOP01588 193 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 MT-ND3P03897 115 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 RORAP35398 523 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 ANP32AP39687 249 aaKnown RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 ITGA1P56199 1179 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 XIAPP98170 497 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 ZNF658BQ4V348 819 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 RBMXL3Q8N7X1 1067 aaKnown RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 IPMKQ8NFU5 416 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 CPT1CQ8TCG5 803 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 MR1Q95460 341 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 HAUS1Q96CS2 278 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 FCRL5Q96RD9 977 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 MAK16Q9BXY0 300 aaKnown RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 GPR87Q9BY21 358 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 ING2Q9H160 280 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 KCND1Q9NSA2 647 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 FAM8A1Q9UBU6 413 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 TFR2Q9UP52 801 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 DNMT3AQ9Y6K1 912 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 TEX15Q9BXT5 2789 aa15.51■□□□□ 0.07
RAB40C-202ENST00000509637 RP1L1Q8IWN7 2480 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-202ENST00000509637 PIKFYVEQ9Y2I7 2098 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 SSU72P8A0A1W2PR75 194 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 MGAT4DA6NG13 374 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 SLC9B1P1A6NJY1 282 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 MASP2O00187 686 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 HCRTR1O43613 425 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 KCNJ13O60928 360 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 SCRG1O75711 98 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 POLBP06746 335 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 CTSBP07858 339 aa15.5■□□□□ 0.07
RAB40C-202ENST00000509637 POLR2CP19387 275 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms