RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ANKRD11Q6UB99 2663 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CPED1A4D0V7 1026 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CDC14CA4D256 554 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 A6NHS1 94 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 OR2AG2A6NM03 316 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 OR52A4PA6NMU1 304 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 D6RAR5 112 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 STX7O15400 261 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 GRID2O43424 1007 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 B4GAT1O43505 415 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 TLX3O43711 291 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 OR1I1O60431 355 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ASMTLO95671 621 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 GOT2P00505 430 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 KELP23276 732 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ACRV1P26436 265 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 PBLDP30039 288 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 STIP1P31948 543 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 PRLHRP49683 370 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 SESN2P58004 480 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 PPP1CAP62136 330 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CCL7P80098 99 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CDH17Q12864 832 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 GPS1Q13098 491 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 NFE2L1Q14494 772 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 PRPSAP1Q14558 356 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 SEPT7Q16181 437 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 BCL7AQ4VC05 210 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 NAPRTQ6XQN6 538 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 SYT10Q6XYQ8 523 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF574Q6ZN55 896 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CHST15Q7LFX5 561 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 SERPINA9Q86WD7 417 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 JAMLQ86YT9 394 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 UNC5BQ8IZJ1 945 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 NDUFAF2Q8N183 169 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 VWA5B2Q8N398 1253 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 SFRP1Q8N474 314 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ARL14Q8N4G2 192 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CLDN19Q8N6F1 224 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CCDC89Q8N998 374 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 FAM46DQ8NEK8 389 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 MDM1Q8TC05 714 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF398Q8TD17 642 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 JPH3Q8WXH2 748 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 NUDT22Q9BRQ3 303 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 TIMM29Q9BSF4 260 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CDH19Q9H159 772 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 CHRAC1Q9NRG0 131 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF624Q9P2J8 865 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ANGPTL2Q9UKU9 493 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 PADI4Q9UM07 663 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 DNAJC16Q9Y2G8 782 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 MSRB2Q9Y3D2 182 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ENTPD2Q9Y5L3 495 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
TOPBP1-207ENST00000509162 TRBV23OR9-2A0A075B6M9 112 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ZCWPW2A0A1B0GU75 182 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 KRT87PA6NCN2 255 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ERI2A8K979 691 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GOLGA8KD6RF30 607 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GOLGA8TH3BQL2 631 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GOLGA8MH3BSY2 632 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 DNALI1O14645 258 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TTI1O43156 1089 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 NRDCO43847 1150 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF189O75820 626 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC25A14O95258 325 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MT-CO3P00414 261 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 RPLP0P05388 317 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 PYGLP06737 847 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 GP1BAP07359 652 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ALPPL2P10696 532 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CTSEP14091 401 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF7P17097 686 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TCP1P17987 556 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 NFKBIAP25963 317 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 MSNP26038 577 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ARCN1P48444 511 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 BLKP51451 505 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CLCNKAP51800 687 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 DRG2P55039 364 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 OR1D5P58170 312 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 DMPKQ09013 629 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TMEM115Q12893 351 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ILF3Q12906 894 aaKnown RBP eCLIP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TARDBPQ13148 414 aaKnown RBP eCLIP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ILKQ13418 452 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CLCA4Q14CN2 919 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 FASTKD3Q14CZ7 662 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 TRADDQ15628 312 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF789Q5FWF6 425 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 CTSL3PQ5NE16 218 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 FNBP1LQ5T0N5 605 aa7.07□□□□□ -1.28
TOPBP1-207ENST00000509162 NKAIN2Q5VXU1 208 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms